| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21361 |
|---|
| Symbol | |
|---|
| ID | 4780864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 1792732 |
|---|
| End bp | 1793880 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640085433 |
|---|
| Product | SqdX |
|---|
| Protein accession | YP_001015956 |
|---|
| Protein GI | 124026841 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAG CTTTCTTTAC AGAAACTTTC CTACCCAAAG TTGATGGAAT AGTCACTCGT
TTAACTAAAA CAATTCAAAA TCTAGTTGCA TCTGGTGATG AAGTAACCGT TTTTTGTCCA
GAAGGCTGTC CATCAAGCTA TATGGGTGCA AAAGTTGTAG GTGTCCCTGC GATGCCATTA
CCTTTATATC CAGAACTCAA GCTAGGGCTC CCTGGCCCAG GTGTTTCAGA TGAATTAGAA
AACTTTAAAC CTGACTTAAT ACATGTCGTC AACCCTGCGG TGCTTGGATT GGGTGGTATT
TGGCTAGCCA AAACAAACAA TATCCCCCTT GTAGCCAGTT ACCACACTCA TTTGCCAAAG
TATTTAGAAC ACTATGGAAT GGGAATGTTA GAGCCGCTTT TATGGGAATT GTTAAAAGCG
GCTCATAATC AAGCAACTCT AAATCTGTGT ACTTCCACTG CAATGGTGCA AGAACTCTCA
GAAAAAGGAA TTCAAAATAC TGCTTTATGG CAAAGAGGAG TGGATACAGA TATTTTCAAA
CCAGAACTTA GAGACGAAGA AATGAGAAAG CGTCTTTTAG GAAGTTTTAG CGATGAAGGA
TCTCTATTGA TATATGTGGG AAGACTCTCA GCAGAAAAAC AAATTGAAAG AATTAAACCT
GTACTTGAAG CACTTCCAAG CACTCGACTA GCTCTTGTTG GAGATGGGCC ATATAGACAA
CAATTAGAAA AAATTTTCCA AGGAACCTCA ACTACCTTTG TGGGATATTT AAGTGGGAAT
GAACTAGCAA GTGCTTATGC ATCCGGTGAT GCCTTTTTAT TCCCCTCAAG TACAGAGACC
CTAGGATTAG TTCTGTTGGA GGCAATGGCT GCTGGATGCC CAGTCGTAGG AGCGAATAAA
GGTGGAATAC CAGATATAAT TTCAGATGGC GAAAATGGAT GTTTATACAA TCCTGATGGA
GAAAATGATG GGGCTTTAAG TTTAATTGAA GCTACAAAAA AATTATTGGG CAACGAAACA
GAACGCACAT CTATGAGAAA AGCAGCTCGT TCAGAAGCTG AGAGATGGGG ATGGGCAGGC
GCTACAAAAC AATTGAAAAG TTATTACGAA GACGTACTAG ACAAAAAACG ATCAAATATT
GCTGCTTAG
|
|---|
| Protein sequence | MKIAFFTETF LPKVDGIVTR LTKTIQNLVA SGDEVTVFCP EGCPSSYMGA KVVGVPAMPL
PLYPELKLGL PGPGVSDELE NFKPDLIHVV NPAVLGLGGI WLAKTNNIPL VASYHTHLPK
YLEHYGMGML EPLLWELLKA AHNQATLNLC TSTAMVQELS EKGIQNTALW QRGVDTDIFK
PELRDEEMRK RLLGSFSDEG SLLIYVGRLS AEKQIERIKP VLEALPSTRL ALVGDGPYRQ
QLEKIFQGTS TTFVGYLSGN ELASAYASGD AFLFPSSTET LGLVLLEAMA AGCPVVGANK
GGIPDIISDG ENGCLYNPDG ENDGALSLIE ATKKLLGNET ERTSMRKAAR SEAERWGWAG
ATKQLKSYYE DVLDKKRSNI AA
|
|---|
| |