Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_21161 |
Symbol | lysC |
ID | 4780251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1770703 |
End bp | 1772469 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640085413 |
Product | aspartate kinase |
Protein accession | YP_001015936 |
Protein GI | 124026821 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.926226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTGC TGGTTCAAAA ATTTGGCGGC ACCTCTCTAG GAAGTATTGA GCGCATAAAA GCTGTCGCGC AAAGAATCAA ATCAAGTAAA GAAAAAGGTG CTGATCTAGT AGTTGTTGTG TCGGCCATGG GACATCAAAC TGATGAGTTA ACACGGCTAG CGTCAGAAAT AACTGTTGAT CCTCCTCATA GAGAAATGGA TATGCTCCTC TCAACTGGGG AGCAAGTTTC AATATCATTA TTAACAATGG CCCTGAACGA ATTGGGCACA CCAGCAATCT CTTTGACTGG AACTCAAGCT GGAATTATCA CAGAATCAGC TCATGGAAGA GCCAGAATCC TCGAGATAAG GACAGAACGA ATAAAAAATC TCTTAGACCA AGGTCAAACC ATAGTTATTG CTGGATTCCA AGGAACAACT CTTGGCATAG GAGGAATTGC TGAAATTACA ACTTTAGGTA GAGGAGGTTC AGATACTTCT GCAGTAGCTC TAGCGGCATC GCTTGAAGCT GCTACATGTG AAATTTATAC CGATGTTCCT GGCGTACTTA CAACTGACCC AAGAATTGTG AAAAATGCAA AATTAATGAA AAGTATTAGT TGTGATGAAA TGTTAGAACT TGCCAGCCTT GGCGCAGCTG TTTTACATCC TCGAGCAGTT GAAATAGCAA GAAATTTCGG CGTAACTCTC GTCGTTAAAT CCAGTTGGGA CAACCTTGAT GGAACCACTC TAACTAGTAA TAAGAAGCCT GACTTTTCTC AAGGTGGAAT AGAACATCAA AGTCCTGTCG ATGGATTAGA ACTTCTTGAG AATCAAGCAG TCGTAGCTTT ATCTAATATT CCAGATCGTC CAGGAATTGC TGCGGAACTT TTTGAATCTT TATCAGAGGG TGGGGTGAAT GTCGATCTCA TTATTCAAGC GACACATCAA ATTGACTCTA ACGACATCAC TTTTACTATT GCTGAAAATG AATTACATAA TGCACTAACT CAATGTAAAA AACTCGTTAA TACTATTGGA GGTGATATCT CTTTTCAAAA AGATCTGACT AAACTAAGTA TTTATGGAGC TGGGATAATG GGAAGGCCTG GAATAGCGTC ATCGCTATTC CAAATTCTAT CTGACTCTGG TATTAATATA AGACTAATCG CAACTAGTGA AGTCAAAGTC AGTTGTGTTA TTGATGCAGA ATTAGGGAAA AAAGCACTAC GTAATGTAAG CGAAGTTTTC AAGCTCACTG ATAAACAAAT TACCGTGAAT CCTACGATTG AAAATAATAA CGAGCCAGAA GTAAGGGGAA TAGCTTTAGA TAAAGATCAA ATACAAATTA GCGTGAAGAA TGTGCCAGAT AAACCAGGGA CTGCCTCATC AATATGTTCC ACTTTAGCTG AGAAAAATAT CAGCTTAGAT ACTATAGTTC AATCTGAAAG AAAGCATAAA GATAAAACCA AAGATATCAG CTTCACTTTA AAGAAAAATG ATAGAAGCGA TGCTAAATAT GCATTAAAAG AATTGATTGA AAATTGGAAA GGAGCAAAAC TCGAAGAAGG AGAGTCAATA GTACGAATTA GCGCAGTAGG TTCTGGAATG CCTTTTACAA AAGGAACAGC CGGTAAAATT TTTAGAGCAC TAGCAAATCA AAAAATCAAC ATAGAAATGA TCGCCACAAG TGAAATAAGA ACAACTTGTA TTATCTCAGA AAAATATGGT GAAAAAGCAT TAAATGAAAT TCATTCTTGC TTTAAATTAG GAAAAAATAA AAGCTAA
|
Protein sequence | MALLVQKFGG TSLGSIERIK AVAQRIKSSK EKGADLVVVV SAMGHQTDEL TRLASEITVD PPHREMDMLL STGEQVSISL LTMALNELGT PAISLTGTQA GIITESAHGR ARILEIRTER IKNLLDQGQT IVIAGFQGTT LGIGGIAEIT TLGRGGSDTS AVALAASLEA ATCEIYTDVP GVLTTDPRIV KNAKLMKSIS CDEMLELASL GAAVLHPRAV EIARNFGVTL VVKSSWDNLD GTTLTSNKKP DFSQGGIEHQ SPVDGLELLE NQAVVALSNI PDRPGIAAEL FESLSEGGVN VDLIIQATHQ IDSNDITFTI AENELHNALT QCKKLVNTIG GDISFQKDLT KLSIYGAGIM GRPGIASSLF QILSDSGINI RLIATSEVKV SCVIDAELGK KALRNVSEVF KLTDKQITVN PTIENNNEPE VRGIALDKDQ IQISVKNVPD KPGTASSICS TLAEKNISLD TIVQSERKHK DKTKDISFTL KKNDRSDAKY ALKELIENWK GAKLEEGESI VRISAVGSGM PFTKGTAGKI FRALANQKIN IEMIATSEIR TTCIISEKYG EKALNEIHSC FKLGKNKS
|
| |