Gene NATL1_20661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20661 
Symbol 
ID4780082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1711178 
End bp1711966 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content38% 
IMG OID640085362 
Producthypothetical protein 
Protein accessionYP_001015886 
Protein GI124026771 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGG GAAGATTTGT TAAAGTTCTA CTTTTACTTT CTATTATTTT TGTTGTCGTT 
CCATTGTCGA CCCAAGCTAA AGTGCTTCCT AAAGTTTTAT TCGAGAAGGC CCTTCAAGAA
AGTAAAGAAG GAGATTTCAT TCGCGCTGAA AAAGATTGGA GTTCTTATTT AAATGATTAC
CCAGATGATG CGGCTGCCTT GAGTAATAGA GGTAATATTC GTCTCGCACT TGGTGATCCT
AAAGGAGCTA TCAAAGATCA AACTAAGTCT ATTGAAATTT CGCCTGAAGA TTTAGACCCT
TATCTGAATA GAGGAATTGC TGAAGAAGCT TTGCAGCGTT GGGAGGACGC CAGTAAAGAT
TACAACTATG TTTTAAACAA TAATCCTAAA GATGTTTCAG CTTTATATAA CTTAGGTAAT
GTAATGGGCT CCATGGATAA TTGGATTGAA GCGAAGAAAT TGTTTGCTCA AGCTGCCTCT
TCAAATAATG CAATAGCTAT GGCTAGCTCA AGTGAGGCGC TAGCGATTTA TCAATTGGGC
GATCTTGAAC TCGCTGAAAA GAAAATCAGA ATATTAATCC GTAAATATCC TTTATTCGCA
GATGCGAGAG CAGCATTAAG TGCTCTTCTA TGGAGTAAAG GCTTTTCAGG TGAAGCTGAA
AGTAATTGGG CTGCGGCTGC TGGATTAGAT ATTCGATATC GAGAGAAAGA TTGGTTGTTG
AATATTCGCC GTTGGCCTCC AAAACCTACA AATGATTTGA TTGCATTTCT TGCATTGGAT
GATAGATGA
 
Protein sequence
MILGRFVKVL LLLSIIFVVV PLSTQAKVLP KVLFEKALQE SKEGDFIRAE KDWSSYLNDY 
PDDAAALSNR GNIRLALGDP KGAIKDQTKS IEISPEDLDP YLNRGIAEEA LQRWEDASKD
YNYVLNNNPK DVSALYNLGN VMGSMDNWIE AKKLFAQAAS SNNAIAMASS SEALAIYQLG
DLELAEKKIR ILIRKYPLFA DARAALSALL WSKGFSGEAE SNWAAAAGLD IRYREKDWLL
NIRRWPPKPT NDLIAFLALD DR