| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_20111 |
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| Symbol | |
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| ID | 4779537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1654438 |
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| End bp | 1655955 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640085303 |
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| Product | phytoene dehydrogenase and related proteins |
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| Protein accession | YP_001015831 |
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| Protein GI | 124026716 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.428487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG AATCTATCAT TGTTGTTGGG GGAGGGATAG CTGGCTTAAC AGGTGCTGCT
CTTCTCTCTA AAGAGGGTTA TCAGGTAACT TTGGTCGAAG CACATAGTCA ATTAGGTGGT
TGTGCAGGAA CTTTTAAAAG AGGTTCTTAT ACCTTTGATG TTGGCGCTAC CCAAGTTGCA
GGTCTTGAGA GAGGAGGAAT TCATCATCGT TTATTTAATT ATTTAGATAT TCCTTTACCT
GATGCAAAAA TTTTGGATCC TGGCTGTTCA GTCACTCTCG GTGATGGGAG TAGGCCAATC
AATCTTTGGC ATGATCCATT GAGATGGCAG AAAGAAAGAC AAGAACAGTT TCCTGGGAGT
GAAATCTTCT GGTCATTATG TTCTAAAATT CATGAAAGTA ACTGGGAATT TGTCGAAAGA
GATCCAATAC TTCCGGTAAG AAATTTTTGG GATTTAAGTC AATTAATTAG AGCCATACGT
CCTTCAAATC TTTTTACTGG TTTTCTGAGT AAGTTAACTA TTACAGACTT GCTTAAAATA
ACTGGTTGTC ATAAAGATAG ACGTCTACGA AGTTTTTTAG ACCTTCAATT AAAACTTTAC
TCTCAAGAGC CAGCAAGTAG AACGGCAGCT TTATACGGTG CAACTGTTCT TCAAATGGCC
CAATCTCCTA GAGGTCTATG GCATCTTCAT GGATCAATGC AAATTCTTAG CGATTTGTTG
AAAGATAGTT TCTTGAGAGA TGGTGGAAGC CTTTTGATTG GGCATAGAGT GACCAAAATA
ATAAGGAAAG AAAATTCAAA TATTTTTGAT GTCAATGTGA TTGATAGAAG AAAGAATTTG
ATACGGATGA AAGCATCAGA TATTGTTTTT AGCTTGCCTC CTCAATCACT TTTAGATTTA
ATTCCTATTG ATGGAGGTTT ATCTACAACA TACCGTGAAA GTATAAAAAA TTTACCTAAA
CCCAGTGGTG CTATTGTATT TTACGGAGCT CTCCGTCGTG TAGATTTGCC CGTTGATTGT
CCAGGTCATA TTCAAGTATT TGATGAGCAT TTTGGTTCTT TATTTATTTC TATCAGTATG
GAAAATGATC AACGTGCACC AGTTGGGATG GCCACTTTAA TAGCAAGTGT ATTTGTAGAT
ATTGATCAAT GGTCTAATCT AGATAGTCAA TCATATATCA GAAAAAAAAA TGTTGTATCG
AAACAGATTA GAGCTATTTT AGATCACAAG TTTGATTTGC TAGAGACGAG TTGGGATCAT
CAAGAACTTT CTACCCCAAG AAGTTTTGAA AGGTGGACTG GACGTCCTAG TGGAATAGTC
GGAGGGCTTG GTCAACATCC AGATCAATTT GGTCCTTTTG GCCTGTCAAG TAGAACCCCT
CTCAGAGGTT TATGGCTTTG TGGAGATTCT ATATACCCTG GTGAAGGTAC CGCTGGCGTA
AGTCAATCAG CTTTGATGGT TGTAAGACAA TTATTGGAAT CTAAAGGTAG ACATCTAAAC
ATCCCTGTCT TTAATTAG
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| Protein sequence | MSEESIIVVG GGIAGLTGAA LLSKEGYQVT LVEAHSQLGG CAGTFKRGSY TFDVGATQVA
GLERGGIHHR LFNYLDIPLP DAKILDPGCS VTLGDGSRPI NLWHDPLRWQ KERQEQFPGS
EIFWSLCSKI HESNWEFVER DPILPVRNFW DLSQLIRAIR PSNLFTGFLS KLTITDLLKI
TGCHKDRRLR SFLDLQLKLY SQEPASRTAA LYGATVLQMA QSPRGLWHLH GSMQILSDLL
KDSFLRDGGS LLIGHRVTKI IRKENSNIFD VNVIDRRKNL IRMKASDIVF SLPPQSLLDL
IPIDGGLSTT YRESIKNLPK PSGAIVFYGA LRRVDLPVDC PGHIQVFDEH FGSLFISISM
ENDQRAPVGM ATLIASVFVD IDQWSNLDSQ SYIRKKNVVS KQIRAILDHK FDLLETSWDH
QELSTPRSFE RWTGRPSGIV GGLGQHPDQF GPFGLSSRTP LRGLWLCGDS IYPGEGTAGV
SQSALMVVRQ LLESKGRHLN IPVFN
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