Gene NATL1_19891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_19891 
SymbolrplF 
ID4780986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1640385 
End bp1640924 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content38% 
IMG OID640085280 
Product50S ribosomal protein L6 
Protein accessionYP_001015809 
Protein GI124026694 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA CTGGAAAAAA ACCAATCTCC CTTCCCGAAA AGGTAGATGT AAAATTTGAA 
GGGCTTTCCA TCACTGTAAA AGGTCCGAAA GGGGAACTGC AGAGAACTCT TCCTAATGGG
GTAAGCCTAA GCAAAGATGA AAATTTTATT TTTGTCAAAC CTATAAATGA AAAGAGACAG
TCTAGGGAAA TGCATGGGCT ATGTAGATCT CTTGTCGCCA ATATGGTTGA GGGAGTTAGC
AATGGTTTTA CAAAAAAACT TGAGATTGTT GGTGTGGGAT CAAGAGCCCA AGTAAAAGGA
AAAACTCTTG TTGTTAGTGC AGGTTACAGT CATCCAGTTG AGGTTGTTCC TCCAGAAGGC
ATAACTTTTA AAGTTGAAAA TAATACAAAT GTGATAGTAA CTGGACCTGA TAAAGAATTA
GTTGGCAATG AAGCTGCCAA AATTAGAGCA ATCAGGCCCC CAGAACCTTA TAAAGGCAAA
GGAATTAAAT ATCAAGGAGA ACTAATAATT AGAAAAGCTG GTAAGTCTGG CAAAACTTAA
 
Protein sequence
MSRTGKKPIS LPEKVDVKFE GLSITVKGPK GELQRTLPNG VSLSKDENFI FVKPINEKRQ 
SREMHGLCRS LVANMVEGVS NGFTKKLEIV GVGSRAQVKG KTLVVSAGYS HPVEVVPPEG
ITFKVENNTN VIVTGPDKEL VGNEAAKIRA IRPPEPYKGK GIKYQGELII RKAGKSGKT