Gene NATL1_19711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_19711 
Symbol 
ID4780553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1625986 
End bp1628583 
Gene Length2598 bp 
Protein Length865 aa 
Translation table11 
GC content31% 
IMG OID640085261 
Producthypothetical protein 
Protein accessionYP_001015791 
Protein GI124026676 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.372007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATG ATGATAAAGA TCAAGGGAAA AATAATATAC CTCAAGTCCA AACATTTACT 
GTTCCATTTG CTTTAGGAGA AACTAAAGAA AACATTAGTA TTTCTAGTAA TAATCGATCT
AAACCTTCTA AAGAACAAAT AATTAATCAA GCAATTAAAT TTCAGCTGAA AGGAAACATT
TCAGAAGCAG CAAAGTATTA TCAATATTTC ATAAATAAAG GTTTCAAAGA TCATAGAGTT
TTTTCTAATT ATGGAGTCAT ATTGAAAGAT CTTGGAAAAT TAAAAGAAGC AGAATTGTCA
TACCGCAAAG CAATTGAAAT CAAACCTGAT TACGCAAATG CTCATTACAA TCTGGGAAAT
ATATTGAGAG ATCTTGGGCA ATTAAAAGAA GCAGAAATCT CATTACGAAA AGCAATTGAA
ATCAAACCTG ATTACGCAGT TGCTCATTCC AATCTGGGTA ATGTATTGAG AGACCTTGGA
AAATCAAAAG AAGCAGGATT GTCATTACGA AAAGCAATTG AACTCAATCC TGACTTAGCA
GAGGCGTATT CCAATCTGGG TAATGTATTG AGAGACCTTG AAAAATTAAA AGAAGCAGAA
TTATCTACTC GCAAAGCAAT TGAAATAAAA CCTGATTACG CAGTTGCGCA TTACAATCTA
GGAACCATAT TGATAGATCT TGACAAATTA AAAGAAGCAG AATTATCATT ACGAAAAGCA
ATTGAACTCA ATCCTGACTT AGCAGAGGCG TATTCCAATC TGGGTAATGT ATTGAGAGAC
CTTGGAAAAT TAAAAGAAGC AGAATTATCG ACTCGCAAAG CAATTGAAAT AAAACCTGAT
TACGCAGAGG CACATTCCAA TCTGGGAGGC ATATTGAGTA ATCTTGGCAA ATTAAAAGAA
GCAGAAATCT CCAGTCGTAA AGCAATTGAA ATAAAGCCTG ATTACGGAGT TGCTTATTCC
AATCTGGGAA CAATATTGAA AGATATTGGC AAATCACAAG AAGCATTTGA CTCTTATCTA
AAGGCGCTTG ATATCAATCC AACAGATTAT GATATTTACA CCTCTATATC TATATTTCTG
AGAGATGCAG ATATTTCACA GTTAGACAAA CTAAAAATAA AAGAAATATT AAATATTATG
CTTGAAAGAA ATGATGTTTC TCATCAAGAA TTATTTAAGC CATTTAACTT TTTATATAGC
AATGAAATAA CAATTAATCT AGCAAAACTA GATTCAGATT CTGCTTCAGA TTTATTTTTA
AATGATAAAT TGATAATTAA TGCACTTAAA AAGATAGTTT TCAAAGATCC AAACTGGGAG
AGACTTCTGA TTAAACTAAG AAAAGATATT TGTAACCGAA TAGCCAATAG AAAAGGAGAG
GTTACAAACT GGCAACTAGA ACTCTTTATT GCTTTGGCTG AACAATGCTT TTCTAATGAA
TATATTTACT CAATAGAATT AGAAGAAACT CAGTCTCTAG AGAAAATAAT AAAAATATGC
AATGAAAGTA AATTAAATGA GACTAATCTT TCAGTTTTAG CTTGCTATTT ACCACTTTAT
AAACTTATAG ATCAAATACC CTCAATAAAA GATTTTAAGT CAACAAAAAA CAACTTAAAT
GCACTTCTAA AGGTTCAACT AGTTGAACCT TTAGAAGAAA TTAAAATATC AAAAGAGATC
ACAAAAATAG GGTCAATTAC TAATCATATT TCTCAAAAAG TAAGGTCTCA GTATGAAGAG
AATCCCTATC CAAGATGGAG ATTTTATGCT TCTTCTAAAG CATCAAAGTC TTCTGCAATA
GTAATAATTA ATAATGATAT AAAGCCCAAT TCAATAACCT CTAATCTAGA ATCAAACCCG
TTAAAGATTC TAATAGCTGG ATGTGGAACA GGTATGCAAA TACTAGAGGC TCAAAAATAT
AGAAATGCCC AAATTACAGC AATAGATATA AGCTGTTCCA GTCTTTCCTT TGCTCAAAGA
AAAATAAATG AAATAGGTAT AAAAAATGTA AACCTATTTC AAATGGATAT TTTAGAAGTT
GCTTTATTAC AAGAACAGTT TGACATCATA GAATGTTGTG GTGTTTTACA TCACATGGCT
GACCCTCAGC AAGGATTAAA GGCATTATTA GACATCTTCA ATCCTAATGG TTTTATGAAA
TTATCATTAT ATAGCGAATT ATCAAGGCAA ACAGTAGTTA AAACAAGAGA ATATATAAAA
GCTAAAAATA TGAATGCCAG TATAGATAAT ATGCGAAATC TAAGAAAAGA TATCTTGTCT
GGCAAATGCC CCGAATTATA TTCTCTTACA AGTCCTGATT CTGATTTCTA TAATACATCC
AATTTCCGTG ACCTTTGTTT TCACTACCAA GAACATCGTT TTACTTTCAA GCAATTAGAG
GATACTCTTA TCACACACAA ATTAAAGTTT CTTGGATTCT GTAGACAATT CCTTAATCTA
CAAACCAGAT CTCTCTATAA GCAATACTTT CCAGAAGATA AGATTCAAGC AAACTTAAAC
AATTGGGGAG AATTAGAAAG AAAACATCCT GGAATCTTTG GGGCAACTCC TCATTTTTGG
GTTTGTAAAG GGGAATAA
 
Protein sequence
MEYDDKDQGK NNIPQVQTFT VPFALGETKE NISISSNNRS KPSKEQIINQ AIKFQLKGNI 
SEAAKYYQYF INKGFKDHRV FSNYGVILKD LGKLKEAELS YRKAIEIKPD YANAHYNLGN
ILRDLGQLKE AEISLRKAIE IKPDYAVAHS NLGNVLRDLG KSKEAGLSLR KAIELNPDLA
EAYSNLGNVL RDLEKLKEAE LSTRKAIEIK PDYAVAHYNL GTILIDLDKL KEAELSLRKA
IELNPDLAEA YSNLGNVLRD LGKLKEAELS TRKAIEIKPD YAEAHSNLGG ILSNLGKLKE
AEISSRKAIE IKPDYGVAYS NLGTILKDIG KSQEAFDSYL KALDINPTDY DIYTSISIFL
RDADISQLDK LKIKEILNIM LERNDVSHQE LFKPFNFLYS NEITINLAKL DSDSASDLFL
NDKLIINALK KIVFKDPNWE RLLIKLRKDI CNRIANRKGE VTNWQLELFI ALAEQCFSNE
YIYSIELEET QSLEKIIKIC NESKLNETNL SVLACYLPLY KLIDQIPSIK DFKSTKNNLN
ALLKVQLVEP LEEIKISKEI TKIGSITNHI SQKVRSQYEE NPYPRWRFYA SSKASKSSAI
VIINNDIKPN SITSNLESNP LKILIAGCGT GMQILEAQKY RNAQITAIDI SCSSLSFAQR
KINEIGIKNV NLFQMDILEV ALLQEQFDII ECCGVLHHMA DPQQGLKALL DIFNPNGFMK
LSLYSELSRQ TVVKTREYIK AKNMNASIDN MRNLRKDILS GKCPELYSLT SPDSDFYNTS
NFRDLCFHYQ EHRFTFKQLE DTLITHKLKF LGFCRQFLNL QTRSLYKQYF PEDKIQANLN
NWGELERKHP GIFGATPHFW VCKGE