Gene NATL1_18581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_18581 
SymbolccdA 
ID4780432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1517728 
End bp1518468 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content37% 
IMG OID640085147 
Productputative c-type cytochrome biogenesis protein CcdA 
Protein accessionYP_001015678 
Protein GI124026563 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAATC TCTTTTTGAA CATTTCTTCT ATAAGTTTAA TTTTCTCTGA TTTGACTCGT 
CATGGCGAGC AGCTAATTAA TAATGGGCTC AATAATCCAA CTCCCCTAAC AATTCTGATA
GTTTTCTCCG GAGGGCTTTT GACTAGCTTA GGTCCCTGTT CACTGTCACT TTTACCAATC
ACAGTTGCAT ATTTAGCTGG ATTTAAAAAT AACCAAAACC CTCTACAAAA AACGATTAGT
TTCTGTAGCG GTATAGTTTT TTCACTAGTG GTATTAGGAA GTCTAAGCGG GTTTTTAGGA
AAAATTTATG GTCAATTACC AGGTTTCTTC TCAATATTCA TTAGTTTTTT AGCAATAATT
ATGGGTCTTA ATCTGCTTGG GATTTTGAAA TTCTCACTTC CATCTGGTCC TGACCCTGAA
ATTTGGAAAA ACAAAGTTCC TTCCGCATTC GCACCAGTTT CAGCAGGTTT TGCTTTTGGA
TTAGCCTCAT CGCCTTGCAC TACTCCTGTT CTTGCAGTTC TTCTCGCTTG GGTTGCTAAA
CAAGGAAATC CTCTAAGCGG CACAATTTTT CTTGGAAGTT TTGCAATTGG ACAAATTGTT
CCTTTATTTG TAGCAGGTAC ATTTGCAGCA AGTATTCCAA AATTATTATC GTTGCGACCT
ATTGGAAAAT GGGTTCCACC AATTAGCGGA GTAATTTTGT TAACCATAGG TCTCATAAGC
CTTCTTTCTA TTTGGATATA A
 
Protein sequence
MANLFLNISS ISLIFSDLTR HGEQLINNGL NNPTPLTILI VFSGGLLTSL GPCSLSLLPI 
TVAYLAGFKN NQNPLQKTIS FCSGIVFSLV VLGSLSGFLG KIYGQLPGFF SIFISFLAII
MGLNLLGILK FSLPSGPDPE IWKNKVPSAF APVSAGFAFG LASSPCTTPV LAVLLAWVAK
QGNPLSGTIF LGSFAIGQIV PLFVAGTFAA SIPKLLSLRP IGKWVPPISG VILLTIGLIS
LLSIWI