Gene NATL1_17911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17911 
Symbol 
ID4781112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1468973 
End bp1469734 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content39% 
IMG OID640085080 
ProductGAF domain-containing protein 
Protein accessionYP_001015611 
Protein GI124026496 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.305194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGTTTCG GCGCCCCAAA AATAAGTAAT GAAGAAGAGC GCTTAAGAGC TCTTGCTGAG 
TACAGGATTT TAGGTACTCA GCCTGAGCAA TGCTACGACG ACATAACGAA GATTGCTTCT
TTAACTTGTG GAACTCCCAT CTCTTTAATG AGCTTGGTTG ATACAGATAC ACAATGGTTT
AAATCAATGT GTGGATTTGA GACGAAAGAA ACATCAAGAG ACGTTTCTTT TTGTGCTCAT
GCAATTGCTA GTTCAGAACC ATTGATTGTT GAGGATGCGC TATTAGACGA GCGATTCAAG
TCAAATCCTT TGGTCGTTGA GGAACCAAAA ATTCGTTTAT ATGCTGGTTT TCCATTGCAA
ACCCCAAATG ATCAGCGAAT AGGAACTCTC TGTGTGATTG ATAGAAAGCC GGGACATTTG
TCTGACCATC AGCATCAAAT TATGGAGGCA TTATCTAGAC AGGTTGTAAC CTTGTTGGAA
CTTCGTAAAA GATCTATTCG TCTTCTTGAT GCTCTTACTC ATATGCATAA TACGGAAGGT
ATTTTAACGA CATGTTCATA TTGCAAAGAG GTAAGGGATT CGGATGGTGA GTGGCAGCAT
CTAGAAAAAT ACCTATCGAA AATCGCAGAT ATTCGTTTTA GTCATGGGAT TTGCGATTTA
TGTATGGAGA AGCACTTCCC AGATGTATTA GAAGTCTGGA GTGATGACAA ACTTAATTTA
AATAGTAAGA AAAGCAAGCC TGAATGCAAA AAAAGTAATT AG
 
Protein sequence
MGFGAPKISN EEERLRALAE YRILGTQPEQ CYDDITKIAS LTCGTPISLM SLVDTDTQWF 
KSMCGFETKE TSRDVSFCAH AIASSEPLIV EDALLDERFK SNPLVVEEPK IRLYAGFPLQ
TPNDQRIGTL CVIDRKPGHL SDHQHQIMEA LSRQVVTLLE LRKRSIRLLD ALTHMHNTEG
ILTTCSYCKE VRDSDGEWQH LEKYLSKIAD IRFSHGICDL CMEKHFPDVL EVWSDDKLNL
NSKKSKPECK KSN