Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_17641 |
Symbol | lpxC |
ID | 4779841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1444242 |
End bp | 1445087 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640085052 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_001015584 |
Protein GI | 124026469 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCTCTT TCCCCGATGA CTATGAAGAA GGTTGGACGC TTCAAAATGA AATTAAAAAA GATGGTATCG GATTGCATAC AGGTCTTAAA TGCACAGTAA TAATTAAGCC AACAGAATTA ACCGGATTTC ATATCTCTTT TTCAAGTGAA CCCAATAAAG TTACTCCCAT AGATATTTCG CAAGTAAGGA ATACTCCTTT ATGTACAACT CTTGATTTGA ATGGAAAAAA AGTAGCTACC GTTGAACACT TGTTGGCTTC ATTACTTGGA GCAGGCTTAA CTCATGCACA TATAGAAATA ACTGGCAGTG AGATTCCCTT ACTTGATGGT TCTGCTATTG GTTGGATCGA GGAAATTCAA AATGTAGGAA TGATTAATTC ACTTACATCT CCCAGACCAA GGCCGGAACT CAAATCTCCA ATTTTTGTCA GCAAAGGAGA AAGTGTGATT TTTGCAATAC CATCAGAAAA ATTGAAATTA GTAGGTTTGA TTGATTTCCC GTATAAGGCA ATTGGACAGC AAATGTTTTC TATTGAGCTA TCCCCAAATA ATTTTGTTAA AGAAATTGCA CCTGCGCGAA CTTTTGGCTT TCTTGATCAG TTAGAAGAAT TAAAGAAAGC TGGTCTAATT AAAGGTGGAG CTCTTGAAAA TGCGTTGGTT TGTAATGGTG ATTCTTGGGT GAATCCACCC TTGAGATTTG CAAACGAACC AGTGCGTCAT AAATTGCTTG ACTTGATTGG AGATTTAGCT TTTGTTGGAT TACCGAAAGC GCAAATTTTT GTTTATAAAG GGTCTCACGC TCTTCATGCT GAATTTGCAG CTTCTCTTCA AAAAGTATTA ACTTAA
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Protein sequence | MFSFPDDYEE GWTLQNEIKK DGIGLHTGLK CTVIIKPTEL TGFHISFSSE PNKVTPIDIS QVRNTPLCTT LDLNGKKVAT VEHLLASLLG AGLTHAHIEI TGSEIPLLDG SAIGWIEEIQ NVGMINSLTS PRPRPELKSP IFVSKGESVI FAIPSEKLKL VGLIDFPYKA IGQQMFSIEL SPNNFVKEIA PARTFGFLDQ LEELKKAGLI KGGALENALV CNGDSWVNPP LRFANEPVRH KLLDLIGDLA FVGLPKAQIF VYKGSHALHA EFAASLQKVL T
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