| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_16541 |
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| Symbol | sppA |
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| ID | 4780448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1347942 |
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| End bp | 1348751 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640084937 |
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| Product | signal peptide peptidase SppA (protease IV) |
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| Protein accession | YP_001015476 |
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| Protein GI | 124026360 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTGGC CCTTGAGACG AAAATCCAAA AAGAGGATGG CACGAATCTG TATTGAAGGT
CCTATCAATT CAGAAACTCG GAAAATTGTT CTAAAAGCAT TAAAGCAAAT TGAGGAAAGA
GAGTTTCCAG CACTATTACT TCGCATTGAT AGCCCTGGGG GAACAGTTGG TGATAGCCAA
GAAATCCATA GTGCTCTCTT GAGGCTAAGA GAGAAAGGTT GTCATGTTGT AGCTAGTTTT
GGCAATATCT CAGCTTCAGG TGGAGTCTAT ATAGGTGTAG GTGCTGAAAA AATTGTTGCA
AACCCAGGAA CAATAACAGG ATCTATTGGT GTAATTTTAA GAGGAAACAA TCTATCAAAG
TTATTAGAAA AGGTTGGTAT TAAATTCGAG ACTGTAAAAA GTGGAATCTA TAAAGACATT
CTTTCCCCTG ATCGCCCTTT ATCAACTGAG GAGAGAGCTC TTCTACAATC TTTAATTGAT
AGCAGTTACG AGCAATTTGT TTTAGCAGTT TCAAAAGGAA GAAATTTAAC CCCAGAAGTG
GTTAAGAGTT TTGCCGATGG AAGAGTTTTT ACTGGAGAGC AAGCTAAAGA ATTTGGGTTG
GTAGATGAAA TAGGTGATGA GAATGATGCA AAACTACTTG CTATAAAAAT TGCGAACCTA
GATGAAAAAA CAAAACCCAT AACATTTGGT AAAACCAAAA AGAAATTATT AGGGTTTTTA
CCTGGAGGGA AAATAATCCA CAATCTTGCA AATGCATTAA ACCTTGAGTT GGAGGGGAAT
GGACAGATCC TTTGGCTCTT TAAGCCATGA
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| Protein sequence | MIWPLRRKSK KRMARICIEG PINSETRKIV LKALKQIEER EFPALLLRID SPGGTVGDSQ
EIHSALLRLR EKGCHVVASF GNISASGGVY IGVGAEKIVA NPGTITGSIG VILRGNNLSK
LLEKVGIKFE TVKSGIYKDI LSPDRPLSTE ERALLQSLID SSYEQFVLAV SKGRNLTPEV
VKSFADGRVF TGEQAKEFGL VDEIGDENDA KLLAIKIANL DEKTKPITFG KTKKKLLGFL
PGGKIIHNLA NALNLELEGN GQILWLFKP
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