Gene NATL1_16531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_16531 
Symbol 
ID4779774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1346938 
End bp1347888 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID640084936 
ProductSMR family transporter 
Protein accessionYP_001015475 
Protein GI124026359 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.724697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTCA TTTGGAATTG GTTTTTGATG ATTTTGCCCT TCGCTCTTTG GGGGACCTCA 
ATGGCGGCGA TGGCACCTTT GGTTAATGCA GCGGGACCTG AGATTGTAGC CTCACTAAGG
CTTTTGCCTG CTGGTCTAGT AGTTTTAGCT TCAGTTCCTT TCTTGAAGAG GAGTTGGAAT
ATTTCAAAAG ATGATTTGGT GTGGTTTTTA GTATTTACTT TGATTGACGC AACGCTTTTT
CAGGTTTTTC TAGCCAAAGG GTTAATGGAA ACTGGCGCAG GATTGGGTTC TGTTCTTATA
GATTCCCAAC CTTTGATGGT TGCTTTGTTA GCAAGAATTT TGTTTGGAGA TGCAATTAAT
CCAATTGGAT GGATTGGCTT GGTTCTTGGC TTGGTTGGAA TAATTTGTCT TGGAGTACCT
ACTGAGTTAC TAGAAAATTG GTTTTTACTT GGCAACTTTG AATCAGGAAG TAATTTTTTA
AGTCATGGAG AAGTATGGAT GATATGCGCA GCAACCTCGA TGGCTTTAGG GACGGTGCTT
ATTCGATTTG CTTGCAGAAA CAGTGATCCT GTTGCTGTAA CTGGATGGCA CATGGTTCTA
GGAAGTGTTC CTCTTATCGT TTGGCATGTA TTCGATAAAA ACTGGCCATT GTTTCCAGAC
TGGTCTGCTT TTGAATGGAC TTTGATGTCT TATTCAAGTT TGTTTGGTAG CGCATTGGCT
TATGGATTAT TTTTTTGGTT TGCAAGTCGA AAAGAATTAA CAAGCTTTAG CACCCTTGCA
TTTTTAACGC CTGTATTTGC CTTGATTACT GGCGGTATTT GGTTGGGAGA GAGACTTTTT
CTCCTTCAAT GGATTGGAGT AGTTTTGGTT TTAATATCAG TACTATTTGT AAGTCAGAGA
CGAAGATTCT GGGGGAATAA AAGTGATAAT GAATTAATAA AAGAGGCTTA G
 
Protein sequence
MFVIWNWFLM ILPFALWGTS MAAMAPLVNA AGPEIVASLR LLPAGLVVLA SVPFLKRSWN 
ISKDDLVWFL VFTLIDATLF QVFLAKGLME TGAGLGSVLI DSQPLMVALL ARILFGDAIN
PIGWIGLVLG LVGIICLGVP TELLENWFLL GNFESGSNFL SHGEVWMICA ATSMALGTVL
IRFACRNSDP VAVTGWHMVL GSVPLIVWHV FDKNWPLFPD WSAFEWTLMS YSSLFGSALA
YGLFFWFASR KELTSFSTLA FLTPVFALIT GGIWLGERLF LLQWIGVVLV LISVLFVSQR
RRFWGNKSDN ELIKEA