Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_15871 |
Symbol | acrA |
ID | 4779526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1294157 |
End bp | 1295230 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640084869 |
Product | membrane fusion protein |
Protein accession | YP_001015409 |
Protein GI | 124026293 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTGGA AAAACTTAAA AAAGAAAAAA GTTATAGGCC TTATTGCACT TTCGGCCTTA AGTGTTGGTG GAATTAGTTT TAAACTTTCA CAAGATAATG CATCGAATAA AGACATAACT GAATTTACAA TTGCTGCTGA AAGCGGCAGT TTGCCTGGTT TGATAACAGC AAGTGGTGAA TTAAAAGCAA ATAAAAGCGT AAATGTAAGC CCAAAAAGAC AAGGAATACT TAACGAAATT TTCGTGGAGG AAGGAGATCA GGTTAAGAAA GGTGATCTAA TTGCGAAAAT GGATTTTGGA GACTTGGAAT TTAGAATTGA AGAGATAAAA GCTAATTATG AGACTCAAAA AGCAAGCTTT AAAAGAAGGG AGATGCTTTT TAATGAAGGA GCCATAAGTG CTGAAGAGTA TGAAGAATAT AAAAATAGAT TTTTAAAAAG CAAAGCCAGA TTCAAACAAA TAGAAGTCGA AGAGAATGAG ACAAGCATTA GAGCACCATT TAGAGGAGTA ATAACCAGCA GATACGCAGT CCCAGGGGCA TTCGTAACTC CTACGACCTC TGCATCTTCC TCAAGAGAGG GTGGGGCTAC AAGTTCATCA ATCGTCAAGC TTTCCCAAGG TCTTGAAATA GTTGCGAAAG TTCCTGAGAG TGATATTGGA AGAATCAAAA CAGGTCAGGA AGCAAGTATC AGAGTAGATG CTTTTCCTGA TAAGCGTTTT AAAGCAGTTG TCTCCAAAAT CTCTCCAAGT GCAATCAAGA ACAACAACGT AACTTCCTTT GAAGTTACGT TGTTGTTGGA GAATAGACCT CAAGATTTAC GCCTTGGCAT GACATCTGAT ATCAACTTTC AAACTGGAGC GACCAAAATC AGCACGCTTA TTCCAACAGT AGCAATTGTC ACAGAAGAAG GGAGAACTGG AGTTCTAATA GTCGGGAATA AGAATCAACC AGAGTTTAAA AAAGTTGAAT TAGGTACAAG CAGTGGCAGT AAGACTGCCA TAATATCTGG GTTAGAACCT GGGGAGAAAG TTTTTATTGA TCTTCCTTCT TGGGCAAAAA AAAGAGAGCG TTAA
|
Protein sequence | MIWKNLKKKK VIGLIALSAL SVGGISFKLS QDNASNKDIT EFTIAAESGS LPGLITASGE LKANKSVNVS PKRQGILNEI FVEEGDQVKK GDLIAKMDFG DLEFRIEEIK ANYETQKASF KRREMLFNEG AISAEEYEEY KNRFLKSKAR FKQIEVEENE TSIRAPFRGV ITSRYAVPGA FVTPTTSASS SREGGATSSS IVKLSQGLEI VAKVPESDIG RIKTGQEASI RVDAFPDKRF KAVVSKISPS AIKNNNVTSF EVTLLLENRP QDLRLGMTSD INFQTGATKI STLIPTVAIV TEEGRTGVLI VGNKNQPEFK KVELGTSSGS KTAIISGLEP GEKVFIDLPS WAKKRER
|
| |