Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_10061 |
Symbol | metH |
ID | 4779773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 929634 |
End bp | 933182 |
Gene Length | 3549 bp |
Protein Length | 1182 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640084284 |
Product | putative methionine synthase |
Protein accession | YP_001014829 |
Protein GI | 124025713 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0164665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCACT TTTTAGACTA TCTAAACTCA GAGAAAAGAC CAATAATAGT CTTTGATGGT GCAACAGGCA CGTCTTTACA AGATCAACAA CTAACTGCAG ATGATTATGG TGGTGCTTCT TTAGAAGGTT GTAATGAGAA TCTTGTTTTA TCCTCTGTCT CTAGTGTTGA GAAAGTACAT CAGTCATTCT TAGAGGCCGG TTGTGATGTA ATAGAAACAA ATACATTTGG CGCAACTTCT ATTGTTCTTG ATGAGTATGG AATTGGAAAC AAAGCTTATG AGATCAATTT CAAAGCTGCA CAAATAGCAA GGAGAATTGC AAATAAATAT CAAACACCTG AAAAGCCAAG ATTTGTTGCT GGTTCAATTG GTCCAACAAC AAAGCTTCCA ACTCTTGGTC ATATCAGTTT TGATGAATTA AAAAAATCTT ATCTTGAACA AGCTAAAGCA CTGATTGAGG GTGGAATTGA TCTTTTTCTT ATTGAAACTT GCCAAGATGT TTTACAAATA AAGGCAGCTC TGCAGAGCGT AAATGAGGCA ATAGGTGATG GAATTAAAAT CCCAGTAATG GTATCTGTAA CCATGGAAAC TACAGGTCAG ATGCTTATAG GTAGCGATAT TTCTTCCATA ACAACAATAT TAGAGCCTTT TAGTATTGAT ATTTTGGGCC TTAATTGTGC TACTGGCCCA GAAGAAATGA AAGATCATAT TAAATACTTA TCTGAGCATT CACCCTTTCA CATAAGTTGT ATTCCAAATG CTGGACTTCC TGAAAATGTA GGAGGTAAGG CTCATTATCG ATTAACCCCA ATGGAACTTA AGTTCCAACT TAGTCATTTT ATTAATGATT TAGGCGTTCA ATTAATTGGT GGCTGTTGTG GGACTAGGCC AGAACATATA AAACAACTTT CAGATTTATC GCTTGAGCTT TTATCATCAG ATCGTAGATT GATTAACCTT TCAAAGAAAA GATCTATAAT TCCAGCTGCA TCTTCAATTT ATGAGTCAAT TCCATATGAA CAAGACAACT CATTTTTGAT AGTTGGCGAA AGATTAAATG CAAGTGGTTC AAAAAAGGTA AGAGAGCTTT TGAATATTGA GGACTGGGAT GGTCTAGTTG GAATAGCAAA ATCACAACTT AAGGAAAATG CGCATGTACT TGATGTAAAT GTTGATTTTG TTGGAAGAAA TGGCATAGAA GATATGTCGA ACTTGGTTAA AAGATTAGTT AATAATATCA ATTTACCTTT GATGCTTGAT TCAACGGATT ATGAAAAAAT GGAGAGTGGT TTAAAACGTG CTGGCGGAAA ATGTATTTTA AATTCCACTA ACTATGAAGA TGGACAAGAT AGATTTCATA AAGTGATTGA TCTAGCTAAA GAACATGGTT CAGCAGTTGT GATTGGAACA ATTGATGAAG ATGGAATGGC TAGAGCTGCA GAAAAAAAAG CTGAAATAGC AACTAGGGCT TTTAAGGATG CTACAAATTC TGGGTTAAAA CCCTATGAAA TTTTTTATGA TCCTTTAGCT TTGCCAATAT CTACAGGACT TGAGGAAGAT AGAAAGAATG GTTTTGAAAC GATTAAAGCT ATTAAGTTAA TTAAAGATCG CCATCCACAA GTACATTTAA TCCTAGGCAT TTCAAATGTA AGTTTTGGCC TATCATCTAG TGCGAGAGTT GTCCTTAATT CTATCTTTCT AAATGAAGCA ATTAAGGCTG GATTAGATTC TGCAATTGTT TCACCATCCA AGATATTACC TTTAAATAAA ATTAGTGAAG AAGAGATAAA AATATGTTTG GATCTTATTT ATGACAAGAG AATTATAGAT AATAGTGTAT GCACTTATGA CCCCCTAACG ACCCTAACTT CTTATTTTGA TGACTCGAAA AAAACTCTAA ATAATAGCTC AATTGATGAG GATATTAATT TACCTATAGA AGATAAGTTG AAGAATCATA TTATTGATGG AGAAAAAACA AATCTACATT CAAATCTTAA TTTAGCATTA AATAAATATA AGCCTTTGAT AATAATTAAT GAATATTTAC TAGATGGAAT GAAAGTTGTC GGGGAATTAT TTGGTTCAGG GCAAATGCAA TTACCTTTTG TACTTCAATC TGCAGAAACA ATGAAATATG CAGTTTCATA TTTAGAAGAT TTTATGGATA AATCTGAGGT AAATCAATCA AAGGGTAAAT TTATTATAGC TACGGTCAAA GGAGATGTTC ACGATATAGG AAAAAATTTA GTAGATATTA TTTTGTCGAA TAATGGGTAT GATGTTATTA ATTTAGGAAT TAAACAAGAT GTCAATGCAA TTATAAAGGC ACAAAAAGAA CACCATGCCG ATTGCATTGC AATGAGTGGT TTACTTGTAA AATCGACTGC CTTTATGAAA GATAATCTTA AAGCTTTAAA TGAGGAAGAT ATTGATGTAC CTATTATTTT AGGTGGGGCA GCATTAACCC CTAAATTTGT TAACCAAGAT TGCGCAAGTG TGTACAAGGG CAAGGTTATT TATGGGAGAG ATGCCTTCAC TGATTTGAAA TTTATGGACG CATATATGAA AGCTAAATTA GCTAATAATT GGAATAACAA AACAGGTTTT TCCGAAGGAG CTCCTGAGGG GATAACTATT GGAACTTATA AAAGTTCTAA TTCTGATCCA AAAGTAATAA AAGAGAGTTT AGAGGTAAAA AAAGTTAACG ACAATTCCAG ATCAAAAGAT ATATCTTCAG TAAAATCTAT TAAACCTCCA TTTTTAGGCC CCAAGGTTTT ACTTGAAAAA GATATTGACT TATCCAATGT TTATAAATTC TTAGACCGTA ATGCATTATT TGCTGGACAA TGGCAAATGA AAAGATCCAA AGACATGTCG GCTTCAGATT ATAAAGAATT TCTTAAGCAA AAAGCTGAGC CAAAATTAGA TTATTGGATG AATAAAATCA TAAATGATAA TCTTATCTCA CCATCTTTGG TATATGGATA TTTTCCATGT GGGAGAGAAG GGAATTACTT AAATGTTTAT GACACTGATC ACAAATCTCT TTTAGGAAAA TTTCTATTAC CCAGACAAAG ATCTGGAAAG AGATATTGTA TCGCAGATTT TTATAATGAC TTAGTAGATA ATCATCCTTC TGATTATCTA CCTATGCAGG CAGTTACAAT GGGAGAAAAA GCTAGTGACT ATTCCCATAA ATTATTTAGC CAAGACTCTT ATTCTGATTA TCTATATTTC CATGGTTTAA CTGTACAATT AGCTGAAGCC CTAGCAGAAT ATATACACTC AATTATTAGA ATAGAGTGTG GTTTTAAATA TGAAGAACCA GATAATATTA AAGATATATT GGATGTAAAG TATAGAGGTT GTAGATACTC ATTTGGTTAC CCAGCTTGCC CAGAAGTATC AGATTCTAGA AAGCAATTAG ATTGGCTAGA TGCAGATAAA ATTAATATAT CTATGGATGA AAGTGAGCAA CTGCATCCAG AACAAAGTAC TACTGCAATT GTTGCATTAC ATCCAGTAGC TAAATACTTT GGTATTTAA
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Protein sequence | MTHFLDYLNS EKRPIIVFDG ATGTSLQDQQ LTADDYGGAS LEGCNENLVL SSVSSVEKVH QSFLEAGCDV IETNTFGATS IVLDEYGIGN KAYEINFKAA QIARRIANKY QTPEKPRFVA GSIGPTTKLP TLGHISFDEL KKSYLEQAKA LIEGGIDLFL IETCQDVLQI KAALQSVNEA IGDGIKIPVM VSVTMETTGQ MLIGSDISSI TTILEPFSID ILGLNCATGP EEMKDHIKYL SEHSPFHISC IPNAGLPENV GGKAHYRLTP MELKFQLSHF INDLGVQLIG GCCGTRPEHI KQLSDLSLEL LSSDRRLINL SKKRSIIPAA SSIYESIPYE QDNSFLIVGE RLNASGSKKV RELLNIEDWD GLVGIAKSQL KENAHVLDVN VDFVGRNGIE DMSNLVKRLV NNINLPLMLD STDYEKMESG LKRAGGKCIL NSTNYEDGQD RFHKVIDLAK EHGSAVVIGT IDEDGMARAA EKKAEIATRA FKDATNSGLK PYEIFYDPLA LPISTGLEED RKNGFETIKA IKLIKDRHPQ VHLILGISNV SFGLSSSARV VLNSIFLNEA IKAGLDSAIV SPSKILPLNK ISEEEIKICL DLIYDKRIID NSVCTYDPLT TLTSYFDDSK KTLNNSSIDE DINLPIEDKL KNHIIDGEKT NLHSNLNLAL NKYKPLIIIN EYLLDGMKVV GELFGSGQMQ LPFVLQSAET MKYAVSYLED FMDKSEVNQS KGKFIIATVK GDVHDIGKNL VDIILSNNGY DVINLGIKQD VNAIIKAQKE HHADCIAMSG LLVKSTAFMK DNLKALNEED IDVPIILGGA ALTPKFVNQD CASVYKGKVI YGRDAFTDLK FMDAYMKAKL ANNWNNKTGF SEGAPEGITI GTYKSSNSDP KVIKESLEVK KVNDNSRSKD ISSVKSIKPP FLGPKVLLEK DIDLSNVYKF LDRNALFAGQ WQMKRSKDMS ASDYKEFLKQ KAEPKLDYWM NKIINDNLIS PSLVYGYFPC GREGNYLNVY DTDHKSLLGK FLLPRQRSGK RYCIADFYND LVDNHPSDYL PMQAVTMGEK ASDYSHKLFS QDSYSDYLYF HGLTVQLAEA LAEYIHSIIR IECGFKYEEP DNIKDILDVK YRGCRYSFGY PACPEVSDSR KQLDWLDADK INISMDESEQ LHPEQSTTAI VALHPVAKYF GI
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