Gene NATL1_10001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_10001 
Symbol 
ID4781074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp921063 
End bp921545 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content39% 
IMG OID640084278 
Producthypothetical protein 
Protein accessionYP_001014823 
Protein GI124025707 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.537095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.391839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCA ATCAGGATGC AAAAAAAGTT CTTTTGCGCA AAATCCCTCA TGGATTATTT 
ATATGTGCAG TAAGAGAGGG TGATGAAATA AATGGTTTTA CAGCTAGTTG GGTAACACAA
GGTTCATTTA CACCTCCATT AGTTGTAATG GCAGTTCGTG CCGATGGATC TAGTCATGGA
ATTATTCAAA GAACAAAGAT GTTTTCTTTA AATGTTTTGA GAGAAGATCA AAAGGACCTA
GCAGCTGTGT TTTTTAAGCC TCAAAAAGGA TTAGGAGGAA GATTTGAAGC TTGTAAATTC
ACTTATGGAG AACTAGGCAT GCCGTTAATC GAAGATGTCA TAGGTGGCGT TGAATGTGAA
GTCATTTCAG GAGTCGAGCA TGGAGATCAC ACAGTTTTCG TCGCTGAAGT AAAGAGTGCA
GTATTGAATA AGGATGGATC TGCCTTAAAT TTAGCGAGCA CAGGTTGGAA TTATGGTGGT
TAA
 
Protein sequence
MTLNQDAKKV LLRKIPHGLF ICAVREGDEI NGFTASWVTQ GSFTPPLVVM AVRADGSSHG 
IIQRTKMFSL NVLREDQKDL AAVFFKPQKG LGGRFEACKF TYGELGMPLI EDVIGGVECE
VISGVEHGDH TVFVAEVKSA VLNKDGSALN LASTGWNYGG