Gene NATL1_09711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_09711 
SymbolilvA 
ID4780209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp890875 
End bp892410 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content37% 
IMG OID640084248 
Productthreonine dehydratase 
Protein accessionYP_001014794 
Protein GI124025678 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.139009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.177122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGACT ATTTACAGAA AATACTAAGA GCTCGCGTTT ATGACGTTGC TGAAGAAACC 
CCACTAGAAA AGGCGAAAAA CTTAAGCAAA AAATTCGAAA ATAACATTTG GTTTAAGAGA
GAAGACCTTC AACCTGTCTT TTCATTCAAG TTAAGAGGTG CATTTAACCG CATGTCTCAG
CTGAGCAAGG AAGAGCTAGA TAAAGGAGTA ATTGCATCAA GCGCTGGAAA CCATGCACAG
GGAGTTGCGT TAAGTGCATC ATTCCTGAAA TGCAGAGCAG TAATTGTTAT GCCACTGACA
ACTCCCGTTA TGAAAGTAAG GGCAGTTGAA TCACACAAGG CAGAAGTTAT TCTTTTCGGT
GAAACTTATG ATGAGTGCTA TGAAAAGGCA CTAGATATAT CTAAGAAAGA AAATCTAACT
TTCATACATC CATTTGATGA TCCTGAAGTC ATAGCAGGAC AAGGAACAAT AGGTCTTGAA
ATACTTAGAC AAAGTCAAAC TCCGCCTGAT GCGATTTACA TAGCTGTTGG AGGCGGGGGA
CTTATTGCTG GAGTAAGTGC GTACGTAAAA GCAATATGGC CAGATACAAA GATTATTGGT
GTTGAACCAG AAGATGCCTG CGCAATGACA CTTTCATTAA AGGCAAATGA ACCTATTGAG
CTTGAGAGTA TTGGCCTTTT TGCAGACGGA GTTGCGGTAA GAAAGGTAGG AGAAAAGACT
TTCTCGATTT GCAAAAAAAA TGTTGATGAA ATGGTTACTG TAAGTACAGA CGAAATTTGT
GCCGCGATAA AAGATGTTTT CGAGGATACA AGATCAATTC TTGAACCAGC AGGTGCATTA
TCTATAGCTG GCTTAAAAAA ACATGTTGTA AATAATCAGT TAAAAAACAA CAACCTTGTT
GCAATAGCTT GTGGTGCAAA TATGAATTTT GAACGACTAA GATTTGTAGC AGAAAGAGCC
GAATTAGGTG AAGAAAAAGA AGCTATGATT GCAGTAGGAA TTCCTGAAAA AGCGGGCAGT
TTAAAACTTT TATGCAAAAC ACTTGGTTCA CGGAGTCTAA CTGAATTTAG TTACAGGATT
TCAGAAGGTA AAACAGCTCA AATATTTATG GGTGTAGAAG TTTCGAATAA CAATGATAGG
GAATTATTAA CAGCTGAGAT CAAAAGGGGA GGTTTTGATT GTCATGATTT AAGTAATGAT
GAATTATCAA AAGTTCATCT CAGGCATATG GTTGGTGGCA GGCTACCAAG ATCAATAAGT
CAAATATCTA AAGGAGAATA CATAGAATTA CTATATAGAT TTGAGTTTCC TGAAAGGCCT
GGTGCCTTAA TGAGATTTGT TAACTCAATG AGACCAGAGT GGACAATAAG CATCTTCCAT
TATCGAAACC ATGGCGCTGA TACTGGAAGA ATAGTAATAG GTGTACTAGT AAACGATTCC
GAGATTCAAG CTTGGAATGA GTTTGTCAAA AAAATAGGTT ATAAAAATTG GGATGAGACA
GATAATCCAG CATATAAATT ATTTTTAGGT GCATAG
 
Protein sequence
MEDYLQKILR ARVYDVAEET PLEKAKNLSK KFENNIWFKR EDLQPVFSFK LRGAFNRMSQ 
LSKEELDKGV IASSAGNHAQ GVALSASFLK CRAVIVMPLT TPVMKVRAVE SHKAEVILFG
ETYDECYEKA LDISKKENLT FIHPFDDPEV IAGQGTIGLE ILRQSQTPPD AIYIAVGGGG
LIAGVSAYVK AIWPDTKIIG VEPEDACAMT LSLKANEPIE LESIGLFADG VAVRKVGEKT
FSICKKNVDE MVTVSTDEIC AAIKDVFEDT RSILEPAGAL SIAGLKKHVV NNQLKNNNLV
AIACGANMNF ERLRFVAERA ELGEEKEAMI AVGIPEKAGS LKLLCKTLGS RSLTEFSYRI
SEGKTAQIFM GVEVSNNNDR ELLTAEIKRG GFDCHDLSND ELSKVHLRHM VGGRLPRSIS
QISKGEYIEL LYRFEFPERP GALMRFVNSM RPEWTISIFH YRNHGADTGR IVIGVLVNDS
EIQAWNEFVK KIGYKNWDET DNPAYKLFLG A