Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_08721 |
Symbol | spsE |
ID | 4779694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 809477 |
End bp | 810505 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640084147 |
Product | ialic acid synthase |
Protein accession | YP_001014695 |
Protein GI | 124025579 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2089] Sialic acid synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.938537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000164183 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATATCA ACGGTAGAGA AATTAATGAG AAAAACACTC CCTTAATAAT AGCGGAACTA GGAATTAATC ACGGTGGAGA TATAGATATA GCAAAAAATA TGGTAACTTT AGCAGCTTCA TCAGGAGCAG AGTGCATTAA ACATCAAACA CATTTTGTGG AAGATGAAAT GACAGAAGAA GCGAAAGATA TTTACCCTCC CAATGCTACT GAATCCATAT GGGATGTTAT AAAAAAATCA TCTCTTAATA AAGATGAAGA AATAGAATTA AAAAAATATA CAGAGGATTT AGGATTAATA TATATATCAA CTCCTTTCTC AAGAGCTGCT GCTGATTTTC TAAATGATAT TAATATACCT GCCTTTAAAA TAGGATCGGG TGAGGCTAGT AATATCCCGC TTATAAGACA TATATCATCA TTTGGAAAGC CTATTATTTT ATCAACAGGA ATGCATTCTT TAGAGCAAAT AATTGAACCA GTTAATATTT TCAAGAAAAA CAAAATAGAT TTCGCCCTTC TAGAATGTAC GAATTCTTAC CCTTCACCAC CTGAAATAGT ATCTCTCCAA GGAATAAAAG ATTTAAAAAA AGCTTTTCCT GAGGCAATTG TTGGTTTTTC TGATCATTCG ATAGGGCCTT ACATATCATT GGGAGCAGTT GCATTAGGGG CTTGTATTAT TGAAAGACAC TTTACTGACT CAAGGTATAG AGAAGGTCCT GACATCTCTT GTTCAATGGA TCCCCTAGAA CTAAGACTTT TAGTAGATAG GTCTAAAGAA ATTTTTACAG CGATAAATAA TCCAAAAGAA AGAACTCTTC AGGAAGAAGA TGTTTACAAA TTTGCGAGAG GTACTATTGT AGCTGATAGA GAAATTAAAA AAGGAACAAT TATCGCAGAA AAAGATATAT GGGCAAGACG TCCTGGTAAC GGTGAAATAG CAGCTGCATT CTATGATAAT ATCTTGGGAA GAAAAACGAA AAAAGATATA AAATATAATC AACAATTAAG ATGGAAAGAT CTTATTTAA
|
Protein sequence | MNINGREINE KNTPLIIAEL GINHGGDIDI AKNMVTLAAS SGAECIKHQT HFVEDEMTEE AKDIYPPNAT ESIWDVIKKS SLNKDEEIEL KKYTEDLGLI YISTPFSRAA ADFLNDINIP AFKIGSGEAS NIPLIRHISS FGKPIILSTG MHSLEQIIEP VNIFKKNKID FALLECTNSY PSPPEIVSLQ GIKDLKKAFP EAIVGFSDHS IGPYISLGAV ALGACIIERH FTDSRYREGP DISCSMDPLE LRLLVDRSKE IFTAINNPKE RTLQEEDVYK FARGTIVADR EIKKGTIIAE KDIWARRPGN GEIAAAFYDN ILGRKTKKDI KYNQQLRWKD LI
|
| |