Gene NATL1_08411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_08411 
Symbol 
ID4780099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp772991 
End bp773659 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content36% 
IMG OID640084116 
Productputative NADH-flavin reductase 
Protein accessionYP_001014664 
Protein GI124025548 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.40154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00485134 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAG CCATAACAGG AGCTTCGGGA AAAACAGGTT TTCGAGTAGC AGAGGAAGCT 
ATATCAGCTG GATATGAAGT GAGATTGATA ATTAGATCAC AGTCTGAGAT TCCTGAATCC
ATACAAGGTT GTGAAAGGTA CGTTTTGTCA GACACTAATG GAACCACACT TGATTATGCA
TTACAAGGTT GTGACAGCCT AGTTATAGCA ACAGGTGCGA GGCCATCTAT CGATTTAACA
GGTCCAGCAA AAGTAGATTA TCTAAATATC AAAAAACAAA TTGAAAGCTG TAAAAGACAA
AAGTTAAATA GGGTTGTTCT TGTTAGTTCA CTTTGCGCTG GGAAATTGAT ACACCCTCTA
AATCTATTTG GTCTAATACT TATATGGAAA AGATTAGGCG AAAGATCTCT ACAAAAAAGT
GGGCTAGATT GGACTGTTAT CCGTCCTGGA GGTCTGAATG AGAATGAAAC TAATTTAAAA
AATCAAAATA TTTTGTTCTC TGGTGAAAAA ACTCAAGAAG AAGGCTCGAT TCCCAGAAGA
CTTGTTGCAA AAGCCTGTAT AGAAGCTTTA AAAACAAATG ATTCTATAGA AAAAATCATC
GAGATTACTA GTAGCGAAGA GAATCCCAAA ACAAATATGA GTAAGGCAAT AAAGGCGTTT
AGTATTTGA
 
Protein sequence
MKLAITGASG KTGFRVAEEA ISAGYEVRLI IRSQSEIPES IQGCERYVLS DTNGTTLDYA 
LQGCDSLVIA TGARPSIDLT GPAKVDYLNI KKQIESCKRQ KLNRVVLVSS LCAGKLIHPL
NLFGLILIWK RLGERSLQKS GLDWTVIRPG GLNENETNLK NQNILFSGEK TQEEGSIPRR
LVAKACIEAL KTNDSIEKII EITSSEENPK TNMSKAIKAF SI