| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_08071 |
|---|
| Symbol | glgC |
|---|
| ID | 4779947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 743772 |
|---|
| End bp | 745067 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640084082 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_001014630 |
|---|
| Protein GI | 124025514 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00949474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAG TACTTGCCAT CATTCTTGGC GGTGGAAAAG GATCACGCCT ATATCCATTA
ACAAAAATGA GAGCAAAACC CGCTGTTCCA TTAGCGGGTA AATATCGACT AATAGATATT
CCAATAAGTA ATTGCATAAA TTCGGACATC AGTAAAATGT ATGTTCTTAC GCAATTCAAT
AGTGCTTCTC TTAACAGGCA TATTGCACAG ACTTACAATC TGAGCGGACC TTTTGGCCAG
GGTTTCGTTG AGGTTTTAGC TGCTCAGCAA ACACCTGAAA CCCCCTCTTG GTTTGAGGGT
ACTGCTGATG CGGTAAGAAA ATATCAATGG CTTTTTCAAG AGTGGGATGT TGATGAATAT
TTGATTCTCT CTGGAGATCA GCTTTATAGA ATGGATTACA GCTTATTTGT TGAGCAGCAT
AGAAAAACAG GAGCTGATTT AACGGTTGCT GCTTTGCCAG TTGACTCAGC ACAAGCGGAA
GCATTTGGTT TAATGCGTAC TGATGAAGCA GGCAATATTA AGGAATTTCG TGAAAAACCA
ACTGGTGACT CATTGAAAGC AATGGCAGTA GATACATCAA GGTTTGGATT GGAAGCAAAT
GAGGCAAAAG AAAAACCTTA TTTGGCTTCT ATGGGAATAT ATGTTTTTAG TCGTTCTACT
CTTTTTGACT TATTAAATAA ATTTCCTTCT TACACAGATT TTGGAAAAGA AATTATTCCT
GAGGCTTTAG GTAGAGGTGA CAAGCTTAAA AGTTATGTTT TTAATGACTA TTGGGAGGAT
ATTGGAACTA TTGGTGCATT CTTTGAATCA AATTTAGCCT TAACTCAGCA ACCTACCCCT
CCGTTTAGTT TTTATGATGA GAAGTTCCCT ATTTATACTA GGCCTAGATA TTTGCCACCT
TCTAAAATTG TAGATACACA AATAACTGAT TCAATAGTGT CCGAGGGATC AATACTTAAA
TCATGTAGTA TTCATCATTG TGTGTTGGGA GTTAGGAGTC GGATTGAAAG TGACGTTGTT
CTAAATGAAA CCCTTGTTAT GGGATCTGAT TTTTACGAAT CTTATGAAGA GAGAATAGCG
CTAAGAAATG GGGGTGGTAT TCCCTTGGGA GTGGGACAAG GCACAACTGT TAAAAGAGCT
ATTCTCGATA AAAATGCTCG CATTGGTGAC AACGTGACGA TAGTCAATAA AGACAATGTG
GAAGAAGCTG ATCGAGCAGA TCAAGGCTTT TATATCCGTA ATGGAATAGT TGTTATCGTC
AAAAACGCCA CAATTCCAGA TGGAACTATT ATTTGA
|
|---|
| Protein sequence | MKRVLAIILG GGKGSRLYPL TKMRAKPAVP LAGKYRLIDI PISNCINSDI SKMYVLTQFN
SASLNRHIAQ TYNLSGPFGQ GFVEVLAAQQ TPETPSWFEG TADAVRKYQW LFQEWDVDEY
LILSGDQLYR MDYSLFVEQH RKTGADLTVA ALPVDSAQAE AFGLMRTDEA GNIKEFREKP
TGDSLKAMAV DTSRFGLEAN EAKEKPYLAS MGIYVFSRST LFDLLNKFPS YTDFGKEIIP
EALGRGDKLK SYVFNDYWED IGTIGAFFES NLALTQQPTP PFSFYDEKFP IYTRPRYLPP
SKIVDTQITD SIVSEGSILK SCSIHHCVLG VRSRIESDVV LNETLVMGSD FYESYEERIA
LRNGGGIPLG VGQGTTVKRA ILDKNARIGD NVTIVNKDNV EEADRADQGF YIRNGIVVIV
KNATIPDGTI I
|
|---|
| |