| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_08031 |
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| Symbol | ccmC |
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| ID | 4779837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 739386 |
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| End bp | 740333 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640084078 |
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| Product | putative heme transporter |
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| Protein accession | YP_001014626 |
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| Protein GI | 124025510 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.966125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGATT TTCAGTTAAA TAATTTTTCT TTTGACCCTG TTGTTTCCCT TGGGTTAGCA
GCTTTTCTTT TCTTGTTGAT AGCTTTGCCT ATTTCATTTT GGTCAGTTGC TGGTGGCAGT
GATTCATCCA AAGCCAGATT TTTAGTTGCA ACATCTAATC TTTTTCTAAC TAGTCAATTG
ATCCTTAGAT GGTGGCAATC GGGACATTTT CCAATTAGTA ATCTCTATGA ATCACTTTGT
TTTTTGACTT GGGGTTGCAC ATTAGCTCAA CTTTTTGTCG AAAGGGCATG GCGGTCTCCA
ATCGTTTCTG CAGTTGCGAC GCCTGTGTCA TTGCTATCAA TAGGTTTTGC CAGTTTTGTT
TTACCTGAGA ATTTACAATC TTCAGCTCCT TTAGTACCAG CACTTCGTTC TAGTTGGTTA
GTTATGCATG TGAGTGTAAT TATGTGCTCT TACGCTGCAT TATTAATAGG GTCAATTTTG
TCTTTTGGTG TCTTTCTTGT TGATGGGAAA AAGCAATTCA ATATCCGTAA TAGTTCCTTT
GGGTCTGGTT CGTTTAGGCA AAGTTCTGAG CTATATCTTG ATGAAAGAAA TGAGAACTTA
AATTCTATAC AACCAATTGA ATTTACAAAT GCTGAGCAAC TTGATTCTTT AAGTTATAGA
TCAATAACTG CTGGATTTTT GTTGCTTACA GTTGGTCTTA TTAGTGGTGC TGTTTGGGCT
AATGAAGCTT GGGGTAGTTG GTGGAGTTGG GACCCTAAAG AAACTTGGGC TTTAATATGT
TGGTTGGTTT ATGCGGCTTA TTTACATACT AGGTTAACAA GAGGCTGGCA AGGTAAAAAG
CCTGCAATTC TTGCTATAGC AGGCTTTTTC GTTATTATTG TTTGCTATAT TGGAGTGAAC
CTTCTTGGGG TAGGTTTACA TAGTTATGGT TGGTTCTTCG ATACATAG
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| Protein sequence | MVDFQLNNFS FDPVVSLGLA AFLFLLIALP ISFWSVAGGS DSSKARFLVA TSNLFLTSQL
ILRWWQSGHF PISNLYESLC FLTWGCTLAQ LFVERAWRSP IVSAVATPVS LLSIGFASFV
LPENLQSSAP LVPALRSSWL VMHVSVIMCS YAALLIGSIL SFGVFLVDGK KQFNIRNSSF
GSGSFRQSSE LYLDERNENL NSIQPIEFTN AEQLDSLSYR SITAGFLLLT VGLISGAVWA
NEAWGSWWSW DPKETWALIC WLVYAAYLHT RLTRGWQGKK PAILAIAGFF VIIVCYIGVN
LLGVGLHSYG WFFDT
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