| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_07851 |
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| Symbol | |
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| ID | 4780374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 717451 |
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| End bp | 718626 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640084060 |
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| Product | ABC-transporter, membrane spanning component |
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| Protein accession | YP_001014608 |
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| Protein GI | 124025492 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.165508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.803737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAATTAA AAAATATTTT TAAAAAAAGG AAAATACCTC TTGCTTGGCT TTTGCTGACA
AGACAACCTT TAAGAATATT GGTAGCCATT GCAGGGATAG CATTTGCTGG AATCTTGATG
TTTATGCAAT TAGGTTTCAG AGATGGTTTG TTTGATGCGA GTGTTACTGT TCATAAGTTG
TTTGACGCAG ATTTGGTATT AATTAGTCCT CGCTCAAAAA GTTCAATAAG TATGAGTGGG
TTTCCTCGAC GAAGATTAGT TCAAGCAATG GCACATAAGG ATGTGACTGG AACAACTGCG
GTTAATTGGA ATTTTTTGCT TTGGCGAAAC CCAGAAAATT TATCAACTAG ATCAATTCTT
GCTTTAGGCT TTGAGCCAAG TAATCCATTG TTGATTGATT CTGATTTTGA GAGAAAGGCT
AAAACTTTAA AAAACAAAGG TAGGGTTTTA TTTGATGATC TTTCCAGAGA TGAATTCGGA
CCTATATCGC CATGGTTCAA ATCAGGACGT GTAGTTGAAA CTGAAGTCGC AGGTAAAAGA
GTTAGAGTTT CTGGGATAGT TAGTCTAGGT CCTTCCTTTG GCGCAGATGG GAATTTAATT
ACTAGCAGTG AGACATACTT AGAATTATCT CCAGGTAATC CTAAAGGAAG TATTGAAATT
GGTTTAGTAA GATTAGCGAA GGGATCTGAT ATTGAAAAAG TTGTGCGCTC TTTAAATATA
AGTTTGCCTA GTGACGTTAA GGTTATGTCT TTGAAATCAT TTATAGATTT TGAAAAAAAT
TATTGGAAAA GTAGTACATC CATTGGATTC ATTTTTACAT TGGGAGCAGC AATGGGATTT
ATTGTTGGTT GTGTAATTGT TTATCAAATT CTTTACAGTG ATGTCAGTGA TCATTTACCT
GAATATGCAA CCTTAATGGC TATGGGTTAC AACTTAAGAA CCCTATTAGG AGTTGTAGCT
AGAGAAGGAT TCATTTTATC AATAATGGGA TATATTCCTG CTTATGTTGC AGGACAAGCT
TTATATGCTT TGGTTAGATC TTCAACTAAA TTACCTGTTG AAATGAGTTT TAGTAGAGCA
TCAATTATAT TTTGCTTGAT ACTTTTTATG TGTATGGGAT CAGCATTAGC AGCTATGAAA
AAATTGGCAG ATGCTGATCC TGCTGAAATA TTTTGA
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| Protein sequence | MELKNIFKKR KIPLAWLLLT RQPLRILVAI AGIAFAGILM FMQLGFRDGL FDASVTVHKL
FDADLVLISP RSKSSISMSG FPRRRLVQAM AHKDVTGTTA VNWNFLLWRN PENLSTRSIL
ALGFEPSNPL LIDSDFERKA KTLKNKGRVL FDDLSRDEFG PISPWFKSGR VVETEVAGKR
VRVSGIVSLG PSFGADGNLI TSSETYLELS PGNPKGSIEI GLVRLAKGSD IEKVVRSLNI
SLPSDVKVMS LKSFIDFEKN YWKSSTSIGF IFTLGAAMGF IVGCVIVYQI LYSDVSDHLP
EYATLMAMGY NLRTLLGVVA REGFILSIMG YIPAYVAGQA LYALVRSSTK LPVEMSFSRA
SIIFCLILFM CMGSALAAMK KLADADPAEI F
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