Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_07221 |
Symbol | hslO |
ID | 4780038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 666311 |
End bp | 667210 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640083997 |
Product | Hsp33-like chaperonin |
Protein accession | YP_001014545 |
Protein GI | 124025429 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00409809 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAGATT CACTAGTTAG AGCGACTGCT GCAAAAGGGG GGATCAGACT AGTCGCCGTA TCAACGACTG AATCTACAAA AGAAGCAAAA GAAAGACATT CTCTTTCCTA TTTAACTTCT GCAATTGTAG GTAGGGCAAT GAGTGCAAGC CTTTTGCTAG CAAGCTCAAT GAAGGTAAAT CATGGAAGGG TGACTTTGAG GATAAGCTCA AATGGACCAC TAAAAGGATT AACTATTGAT GCGGGTAGAG ATGGAAGTGT GAGAGGCTAC GTTGGCGATC CAAGTCTTGA ATTAGACCTA ATTAAGAATA AAAGCAACCA CTATACATTT GATTTCAAAA AAGCTACAGG TATTGGCTAT CTTCACGTTA TTAGAGATGA CGGAAAAGGT GAACCACACA ACAGCACAGT CGAATTAATT AATGGAGGGA TAGGTGAAGA CATAGCTTCC TATTTATTAC ATTCCGAACA AACGCCCTCT GCTGTGTTTG TTGGAGAAAG AATCAATCAA GATGGGATAG TTTGTAGCGG AGGACTTTTA GCACAAATAC TACCTAAAGC AGAACGAGAT TATTCATTGA TAGACTTACT TGAAGATCGA TGTAAAGAGA TTAACTCTTT TAGTGAGTTA TTAAACAAAA AAGGGAATAA CCTTATTTCT CTTATTGAAG AGATTTTCCC AGATCTTGAT CAATCACCTT CAGATATTAT TAGCACATCT CAGGAAGTTC GTTTTAAATG TAGATGTTCA AGAGAAAGAA GCCTATCAGC GTTAAAGATT TTGGGGAAAG ATGAACTTCA GAAAATGATA AAGGAAGATG GGAAAGCAGA ACTAACATGT CAATTCTGTA AAAATGTTTA TCTTGTTAAA GAGGACGAAT TGATATCTTT AATCGATTAA
|
Protein sequence | MTDSLVRATA AKGGIRLVAV STTESTKEAK ERHSLSYLTS AIVGRAMSAS LLLASSMKVN HGRVTLRISS NGPLKGLTID AGRDGSVRGY VGDPSLELDL IKNKSNHYTF DFKKATGIGY LHVIRDDGKG EPHNSTVELI NGGIGEDIAS YLLHSEQTPS AVFVGERINQ DGIVCSGGLL AQILPKAERD YSLIDLLEDR CKEINSFSEL LNKKGNNLIS LIEEIFPDLD QSPSDIISTS QEVRFKCRCS RERSLSALKI LGKDELQKMI KEDGKAELTC QFCKNVYLVK EDELISLID
|
| |