| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06741 |
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| Symbol | amiC |
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| ID | 4781228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 620781 |
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| End bp | 621845 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640083950 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001014499 |
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| Protein GI | 124025383 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.142598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAC TAGGATTGTT TGCGGGATTT ATTTTTTGTT CCAATCTCTT TATTTCTTTA
CCTCTAAAAT CTGCTAGTGC TCTTGCCGCT TGGGCCCTAA CTAGTAACGG TAGCCTTAAA
TTACGAACTT CCTCTGGGGC TAAATTAGAT GCTTTTTATC AATCTTCAAC TACTGATAAG
GGTGATAGGG TTTGGATCGA TTTCACTGGA GAATTAAGCC GCCCTAGGAC TATTAAAGGT
AATGGATCAG TTAAGGAAAT CAGGCTAGGA AAACCCTCTA AGGGTAAAAC AAGGCTTGTT
ATTGAATTTC TGCCATCAGT AGAATTAGAA CCATCAAAAT TACAATTAAT TGGTATATCA
ACAAATACCT GGGAGTTGGA ACTTATTGGT CTAGAAAGTA ATTCTTTTCG TCCGATTGAA
GAAGGTAATA TCCTAAGAAA CTCAATAAAA AGAACTTATG AAAAAATAAA GCCTCAAGAT
TTAGATATTT CTTCTTTACC AGATGTACCC TATGGAAAGT ATAAAGTTGT TATCGATCCA
GGGCATGGTG GCTCAGACCC TGGTGCTGTT GGAATTAATG GATTAAGAGA GACTGATATT
GTTTTAGAAG TGTCAAAGAG TGTTTCAGAT TTTCTAACAA ATAAAGGAGT TAAAACTATT
TTAACTCGGA ATCATGAGAG AACATTAGAC TTACAGCCAA GAGTTGCCAA GGCTAATAAT
TCAAAAGCAG ATATTTTTGT TAGTATTCAT GCAAATGCAA CGCGAGGAAA GAGAAAAGAA
GTTAATGGCT TAGAGACATA TTATTACTCT GGTTATAAAG GATATTCTTT AGCTAAAAAT
ATACAAAAAC AAATTTTGAT TGTTTCTCCG CAAAGTCCTG ATAGGGGTGT TCGTAGATCA
CGCTTTTATG TGATAAGAAA AACATCAATG CCTGCAGCTT TAGTAGAAAT TGGATTTGTT
ACTGGTACGT ATGACGCCGA TTTGTTACGA CAAAAAGTTT ATAGGGATAA AATGTCTTTT
GCTATTGCTA GGGGAATACT TAACTATCTA AAAATTTCAA AATAG
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| Protein sequence | MSKLGLFAGF IFCSNLFISL PLKSASALAA WALTSNGSLK LRTSSGAKLD AFYQSSTTDK
GDRVWIDFTG ELSRPRTIKG NGSVKEIRLG KPSKGKTRLV IEFLPSVELE PSKLQLIGIS
TNTWELELIG LESNSFRPIE EGNILRNSIK RTYEKIKPQD LDISSLPDVP YGKYKVVIDP
GHGGSDPGAV GINGLRETDI VLEVSKSVSD FLTNKGVKTI LTRNHERTLD LQPRVAKANN
SKADIFVSIH ANATRGKRKE VNGLETYYYS GYKGYSLAKN IQKQILIVSP QSPDRGVRRS
RFYVIRKTSM PAALVEIGFV TGTYDADLLR QKVYRDKMSF AIARGILNYL KISK
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