Gene NATL1_05971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05971 
SymbolchlL 
ID4779851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp542607 
End bp543497 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content40% 
IMG OID640083874 
Productprotochlorophyllide reductase iron-sulfur ATP-binding protein 
Protein accessionYP_001014424 
Protein GI124025308 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01281] light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.848004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.641306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGA CAATAACTCG TAAGGAGGAC GGTGAAGGTA GTGTTCAGGT AAAACAAGAC 
CCGAAAGCAC AAATTCAGGA AGGAGCACTG GTTATTGCTG TTTATGGCAA AGGAGGTATT
GGTAAATCAA CTACTTCTTC TAATTTGTCT GCCGCATTTT CAAAGCTTGG AAAGAAAGTA
CTTCAAATTG GTTGTGATCC AAAGCATGAC AGCACTTTTA CCCTTACGCA CAAAATGGTG
CCTACCGTCA TAGATATTCT TGAAGAAGTA GATTTTCATA GTGAAGAACT AAGACCTGAA
GACTTTATGT TTAAAGGTTT CAATGGGGTT ATGTGCGTTG AGAGTGGTGG ACCACCAGCG
GGAACTGGCT GTGGTGGTTA TGTCACAGGT CAAACGGTCA AACTATTAAA AGAGCATCAT
CTTTTAGAAG ATACTGATGT AGTTATATTT GATGTTCTAG GTGACGTTGT ATGCGGTGGC
TTCGCAGCTC CATTGCAACA CGCAAATTAT TGTCTAATTG TTACCGCAAA TGATTTTGAT
TCTATTTTCG CAATGAATCG CATCGTCGCA GCAATAAACG CTAAAGCAAA AAATTACAAA
GTTCGTTTAG GAGGTGTCAT AGCGAACCGA TCTGCTGAAT TAGATCAGAT AGAGAAATTC
AATGAAAGAA CAGGTCTTAA GACCATGGCT CATTTCCGTA ACGTAGATGC AATACGCAGA
TCAAGACTCA AAAAGTGCAC AATTTTCGAG ATGGATTCGG AAGAGGAAGG CGTAGTGGAA
GTACAAAATG AGTATCTTTC ATTAGCCCAG AAAATGATAG ATAACGTTGA GCCATTAGAG
GCAGAACCCT TAAAAGACCG TGAAATATTT GATCTATTGG GCTTTGATTA A
 
Protein sequence
MTSTITRKED GEGSVQVKQD PKAQIQEGAL VIAVYGKGGI GKSTTSSNLS AAFSKLGKKV 
LQIGCDPKHD STFTLTHKMV PTVIDILEEV DFHSEELRPE DFMFKGFNGV MCVESGGPPA
GTGCGGYVTG QTVKLLKEHH LLEDTDVVIF DVLGDVVCGG FAAPLQHANY CLIVTANDFD
SIFAMNRIVA AINAKAKNYK VRLGGVIANR SAELDQIEKF NERTGLKTMA HFRNVDAIRR
SRLKKCTIFE MDSEEEGVVE VQNEYLSLAQ KMIDNVEPLE AEPLKDREIF DLLGFD