Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_05861 |
Symbol | rps1b |
ID | 4779938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 532303 |
End bp | 533700 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640083863 |
Product | 30S ribosomal protein S1 protein B, putative Nbp1 |
Protein accession | YP_001014413 |
Protein GI | 124025297 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAT CGGCGAGTTT GAAAAATGAT AGAAATCTCC TAATAATTAA AAAACAACTT ACCCTTGACT GTAAGAATGT TTCACTTATT ACCAAGGGTA TTATGGCCGG GTCAGATCCT CAGCCTAAAA AAGCAACTCC CCCAAGGCCG GCAATAAATG CACCTCGCAA GCCATTGCAG GTTATGCATA TCAGTCGAAA GCCTGAAGAA GAAATAATCA ATGAAGGATC ATCTGAGAAA GAATTTTCCG AGCAACCTAA GGATAGAAGA TTTGATGAAA AGGTTCTAGC TCCAAAAGAA ATTTCTTACT TAAAGAAAGC GCCTGAACAA CAAAAATCAA TTGGGCAAGA CTCTAGCGAT GATTTCCAGT CAGCGACAAT GGAAGATCTT CTGAGATCTG AGAATAATAC TAACTATAAA AATAATATTG AAGCTTTCGA TGATCAAAAT ATTTTTGAAC AAAAAAGTAG AACAGTTGAT GAATTTGATT TTGATGAAGA CGAATTCTTA GCAGCCTTAG AAGAAAACCA ACCAATTGGG ACAACTGGAG AAATTGCAAA AGGTTCAGTT ATTGCAGTTG AAAGTGATGG TATTTACGTA GACATAGGAG GTAAAGCTCC TGGATTTATG CCAAAAAATG AATGTGGTCT AGGTGTAATT ACAAATTTAA AAGAGCGTTT CCCAAAAGGG TTAAAAGTCG AAGTTCTTGT TACTAGAGAA CAAAATGCAG ATGGGATGGT AACAATCAGT TGTAGGGCGT TAGAACTAAG AAAAAGCTGG GACAAAGTTC AAAATCTTGC AAAAGAAGGA AAAGTTATTC GAGTTAAAAT AAATGGTTTT AACCGTGGGG GTGTTACTTG CGACTTCGAA GGTTTAAGAG GTTTTATTCC TAGATCTCAG CTTGAAGATG GAGAAAATCA TCAATCTCTT GTTTCAAAAA CAATTAGTAC TGCTTTTTTA GAGGTAAATC CAGAGAGGCG AAAACTTGTT CTCTCCGAAA AGAAAGCGGC AATTGCTTCA AGATTTTCAG AATTAGAAAT CGGACAACTA ATCGAAGGCG AAATCTTAAC AATAAAACCT TATGGTTTTT TTGTTGATTT GAGGGGTGTA AGTGGATTGT TGCATCATTC AATGGTAACT AATGGAAGCA TGAGAAGCCT TAGAGAAGTT TTTCAACCAG GTGAATCCAT CAAAGCTTTG ATAACTGATT TAGATCCATC TAGAGGACGA ATTGGATTAA ATACAGCTCT TTTAGAGGGG CCTCCAGGAG AACTTATTAC TGATAAGACA AAAGTTATGG AAGAGGCAAA TGAGAGAGCG ATTAAAGCGA GAAATAGCTT GAATAAAGAA AAAGTTGATC CTCAAAAGGA AAAGGAAGAC ATCAACTTAT CCTCATAA
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Protein sequence | MLKSASLKND RNLLIIKKQL TLDCKNVSLI TKGIMAGSDP QPKKATPPRP AINAPRKPLQ VMHISRKPEE EIINEGSSEK EFSEQPKDRR FDEKVLAPKE ISYLKKAPEQ QKSIGQDSSD DFQSATMEDL LRSENNTNYK NNIEAFDDQN IFEQKSRTVD EFDFDEDEFL AALEENQPIG TTGEIAKGSV IAVESDGIYV DIGGKAPGFM PKNECGLGVI TNLKERFPKG LKVEVLVTRE QNADGMVTIS CRALELRKSW DKVQNLAKEG KVIRVKINGF NRGGVTCDFE GLRGFIPRSQ LEDGENHQSL VSKTISTAFL EVNPERRKLV LSEKKAAIAS RFSELEIGQL IEGEILTIKP YGFFVDLRGV SGLLHHSMVT NGSMRSLREV FQPGESIKAL ITDLDPSRGR IGLNTALLEG PPGELITDKT KVMEEANERA IKARNSLNKE KVDPQKEKED INLSS
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