Gene NATL1_05471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05471 
Symbol 
ID4780408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp495530 
End bp496558 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content30% 
IMG OID640083824 
ProductG3E family GTPase 
Protein accessionYP_001014374 
Protein GI124025258 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.295768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA ACGTATCTAA TCTTAATAAA AATATGGCTT CCAAAACAAA TATCCCTATT 
ACAATTATAT CAGGGTTTTT AGGCTCAGGT AAAACAACTT TATTAAATCA TATACTTACT
AATCAGCAAG GTATAAAGAC AGCTGTATTA GTTAACGAGT TTGGCGAAAT AGGAATTGAT
AATGAGTTAA TAATTAAGAC TGAAGAAGAA ATGATAGAAC TAAGTAATGG ATGCATATGT
TGCTCTATAA ATGGTGAGTT AGTAGAAGCA ATAGAAAAGT TAATTAATGT CAACAAGAAG
TTAGACTACA TTATCATTGA AACTACAGGA TTAGCAGATC CTCTTCCAGT TGCGATGACA
TTACTTGGAA GTGATTTAAG AGATCAAACA AGATTAGACT CAATTATAAC TCTAATTGAT
GCTGAGAACT TTAATGATGT TGCTTTAGAA AGTTCAATAG GAAGATCACA GGTAATCTAT
GGTGATATTT TACTTCTAAA TAAATGTGAT TTAGTAACTA ATAAAAATAT AGAAGAAACA
ATAGACAAGT TAAAAGAAAT AAAAAATGAT GTGAGAATTT TAAAAAGCAT TAAAGGAAAT
ATTCCTCTTA ATCTATTATT AAGTGTGGGT CTATTTGAAA CTGATCTAAT TAATCAAAAA
GAATCAGTCC ATGATCACTC TCATGGACAT GGACATGGAC ATGGACATGG ACATGTCCAT
GGACACTCAG AGGAAGATAA TAGAATTGAA GATTTTCTTT CTGTTTCTTT TCAAACTAAA
GAACCTTTCT CTCTTAGAAA ATTCCAATAT TTTCTAGATA ATCAATTAAA AAGCGATGTT
TTCAGAGCAA AGGGTATACT TTGGTTCAGC GAAAGCGAAA GAAGACATGT CTTTCACCTC
GCTGGCAAAA GAATTTCTAT TGAAGATAGT GAATGGGGAG AAGAAAGAAA TAATCAACTT
GTCTTTATTG GTAAAGAATT AGATAAAGAA AAAATACTCT CTCAATTAAA TGCATGTATT
GACAAATAA
 
Protein sequence
MNTNVSNLNK NMASKTNIPI TIISGFLGSG KTTLLNHILT NQQGIKTAVL VNEFGEIGID 
NELIIKTEEE MIELSNGCIC CSINGELVEA IEKLINVNKK LDYIIIETTG LADPLPVAMT
LLGSDLRDQT RLDSIITLID AENFNDVALE SSIGRSQVIY GDILLLNKCD LVTNKNIEET
IDKLKEIKND VRILKSIKGN IPLNLLLSVG LFETDLINQK ESVHDHSHGH GHGHGHGHVH
GHSEEDNRIE DFLSVSFQTK EPFSLRKFQY FLDNQLKSDV FRAKGILWFS ESERRHVFHL
AGKRISIEDS EWGEERNNQL VFIGKELDKE KILSQLNACI DK