Gene NATL1_05091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05091 
SymbolispD 
ID4780903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp464000 
End bp464671 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content40% 
IMG OID640083784 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_001014336 
Protein GI124025220 
COG category[I] Lipid transport and metabolism 
COG ID[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.245946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAATTG CGGCGGCAGG AAGTGGGAGT CGAATGGGTG CTGATAGAAA TAAACTCCTT 
TTGAAGGTTG CAGGTAAGAC GGTTTTAGAA TGGACTTTAA AAGCAGCATT CGAGGCTAAA
ACAATTTCTT GGATTGGAAT TATTGGACAA CCCAAAGATA AAAATCCCAT TTGTTCAATT
CTTGATAACT CAGTAAAGGC AGTTCAATGG ATCAATGGAG GATCAACAAG ACAGCAGTCA
GTTCAACTGG GATTAGCTGC CCTTCCAAAT GATGCAAAGT CTGTGCTGAT TCATGATGGA
GCAAGATGCT TGGTGAGACC ATTCGTTTTT GATGAGATCT CAAAGATTGT TTCCAAGGGA
CAATCTGTTA TTGCTGCTTC ACAAGTCACT GACACCATAA AAAAGGTTGA TATAGATGGT
GAGATTATTG AGAGCCCTCC TCGCTCAGAT TTATGGGCTG CGCAGACACC TCAGGGTTTT
CCAGTAAATA AACTGAAGCA TGCTCATAGT GAAGCAATCT CCAAAGGATG GAATGTAACC
GATGATGCAT CCTTGTTTGA ACGTTTAGGA TTGACAGTGA AAATATATGA TGCGGGACCT
TCAAATATTA AAGTGACAAC TCCATTTGAT CTCGTAATAG CAGAGTCTTT ATTGTCTACT
TTAAAAGACT AA
 
Protein sequence
MLIAAAGSGS RMGADRNKLL LKVAGKTVLE WTLKAAFEAK TISWIGIIGQ PKDKNPICSI 
LDNSVKAVQW INGGSTRQQS VQLGLAALPN DAKSVLIHDG ARCLVRPFVF DEISKIVSKG
QSVIAASQVT DTIKKVDIDG EIIESPPRSD LWAAQTPQGF PVNKLKHAHS EAISKGWNVT
DDASLFERLG LTVKIYDAGP SNIKVTTPFD LVIAESLLST LKD