Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_04991 |
Symbol | cyoB |
ID | 4780961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 453952 |
End bp | 455592 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640083774 |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_001014326 |
Protein GI | 124025210 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.217716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTT CACTCAAACC AAACAACTCT TCTCCAGAAA AACTTCAACC AACAGGATGG CTCAAATATC TGAGTTTTAG TCTTGATCAC AAAGTCATAG GACTTCAATA TTTAGTTTGT GGTTTCTTGT TTTATTTAAT TGGAGGATCT TTAGCTGGAG CAATAAGAGT AGAACTGATC AGTCCCCTCT CAGATTTTAT GCCTAGAGAG GTTTACAACC AGGTTTTAAC TCTCCACGGC ACAATCATGA TTTTCTTATG GATCGTGCCT GTAGTAAATG GTGCCTTTGG AAACTACTTA ATACCCTTTT ATGTTGGGGC TAGGGACATG GCTTTCCCAA GGCTGAATGC AGTTGCTTTT TGGCTAATAC CTCCCTCTGG CTTAATGTTG ATAACAAGTT ATTTCATAAA CGGAGCCGCA CAATCAGGGT GGACAGCTTA CCCACCTTTA AGCATTACGA CTCCAGCCGC TGGGCAAATC ATTTGGATAT TAAGTGTCTT GCTTTTGGGT GGGAGCTCAA TTTTTGGTGG CATTAATTTC ATCGCCACCA TCCTCAAGCT AAGGAGACCT GGTCTTAAAT TAATGCAATT ACCTATGTAT TGCTGGGCAA TGCTTGGCAC GAGTATTCTT GTAGTTCTAT CAACTCCTGT TCTCGCTGGT ACTCTAATAC TGCTGAGCTT TGACATAGTT GCTCATACCG GTTTCTTCAA CCCAAGTCTT GGTGGGAATG TAATCGTTTA TCAACATCTT TTTTGGTTTT ACTCGCATCC TGCTGTTTAT ATCATGGTCT TACCTGCCTT TGGTTTAGTC AGTGAAATAC TTCCAATCCA TAGTAGAAAA CCACTTTTTG GCTATACAAC TATGGTCTTC TCAATTATGG GAATAGTTGT GTTGGGTCTA GTTGTTTGGG CTCATCATAT GTTTACAAGC GGTACTCCTC CTTGGATGCG CTTATTTTTT ACAATCGCTA CTGCATTTAT AGCTGTTCCC ACAGGTATTA AATTTTTTAA TTGGGTTGCG ACCTTATGGG GAGGAAAAAT ATCACTTAAT GCTGCAATGT TATTTTCCTG CGGATTTATT ATTAACTTTG TTTTAGGTGG AATAACGGGA GTTGCCCTAG CGCAAGTACC TTTTGATGTT CATGTACACG ACACTTATTT TGTTGTTGCC CATTTTCATT ACATAGTTTA TGGCGGTTCT GTCTTTGTTA TCTTCTCCTC GATTTATCAC TGGTTCCCAA AATTTACTGG AAAAATGCTC AATGAAAATC TTGGAAGATT CCACTTTATA ATTACTTTTA TAGGCTTTAA TCTTTGTTTT GCTCCTCAAC ATTGGCTAGG TTTAAACGGA ATGCCTCGAC GAGTTGCCGA ATACGATCCA CAATTTCAGT TAATCAATCA AATTAGTAGT GTAGGTGCAT TATTAATGGC TTTAAGTACT TTACCTTTCT TATGGAATAT TCTTCAAAGC ATCCTCTTTG GGGAAGAGGC TGGTGATAAC CCTTGGAATG CACTAACTCC TGAGTGGTTA ACAAGTTCTC CTCCTCCTGT TGAGAATTGG GACGGAGAAG CCCCACTAGT TCTTGAACCT TATGGTTATG GAGAAAAAGA TTCAAATGAG ACTCAGGAGG CAATCAGATG A
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Protein sequence | MTISLKPNNS SPEKLQPTGW LKYLSFSLDH KVIGLQYLVC GFLFYLIGGS LAGAIRVELI SPLSDFMPRE VYNQVLTLHG TIMIFLWIVP VVNGAFGNYL IPFYVGARDM AFPRLNAVAF WLIPPSGLML ITSYFINGAA QSGWTAYPPL SITTPAAGQI IWILSVLLLG GSSIFGGINF IATILKLRRP GLKLMQLPMY CWAMLGTSIL VVLSTPVLAG TLILLSFDIV AHTGFFNPSL GGNVIVYQHL FWFYSHPAVY IMVLPAFGLV SEILPIHSRK PLFGYTTMVF SIMGIVVLGL VVWAHHMFTS GTPPWMRLFF TIATAFIAVP TGIKFFNWVA TLWGGKISLN AAMLFSCGFI INFVLGGITG VALAQVPFDV HVHDTYFVVA HFHYIVYGGS VFVIFSSIYH WFPKFTGKML NENLGRFHFI ITFIGFNLCF APQHWLGLNG MPRRVAEYDP QFQLINQISS VGALLMALST LPFLWNILQS ILFGEEAGDN PWNALTPEWL TSSPPPVENW DGEAPLVLEP YGYGEKDSNE TQEAIR
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