Gene NATL1_04161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_04161 
Symbol 
ID4779322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp381145 
End bp382518 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content38% 
IMG OID640083686 
Productcarboxyl-terminal protease 
Protein accessionYP_001014245 
Protein GI124025129 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.63143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTGTA CTTTCAAATA TCTTACTCGA TGTGCCCCTT GGTCGCCGCA AAAGATCAAT 
CCAATGCTCT CAACTGTTAA ATCTTTAACT AAGCCACTGC AAAGACTTTT TGCAGTATTA
ATTAGCTTTG GGATTTTATT TCAAGTCTTT ACTCAGCCCG CTTTTGCCCT AAATGATGGA
CAATTGCTTG TTATTGAGGC ATGGAATCAA GTAAATGCAG GTTATTTAGA TCCTAAGAAA
TTTGATGAAA TTCAATGGAA AAAACTTCGT CAAAAAGCTC TTGAAAAGCC AATAAACAAT
TCTCAACAAG CCTATTCAGC TATTGAAGCA ATGCTTCTTC CTCTTGGAGA TCCATATACG
CGCTTATTAA GACCAGTTGA TTACGAGGCG ATGAAGAAAA GCAATATAGG TAGTGAAATT
AATGGAGTTG GACTTCAATT AGGAGCAAGA AAAGAAGATG GAGACATAGT CGTAATATCT
CCTCTTGAAG GCTCTCCAGC ATCGGATGCA GGAATTACAA GTGGAACGAT TATAAAAAAA
GTCAACGGTC AATCCCCCAA GCAATTAGGC CTAGAAGCAA CAGCAGCAAA ATTGAGAGGC
CAAACTGGAA CACAAGTAAT CGTTGAATTA GAGCAGCCTG ACAATGAAAT AAAAGAAATT
TCTTTAGAAA GAAGAAGTGT TGATTTAAGA CCAGTTAGGA CTAAGAGAAT AAGGAACGAA
TCACATACAT TTGGTTATTT AAGAATTACA CAATTTAGTG AGGGAGTCCC TGAGCAAGTC
AAGGAAGCAT TAGAAGAACT TTCTGGGAAA GAAATAGATG GACTAATTTT GGACCTAAGA
AATAACTCTG GAGGTCTCGT AAGTTCTGGA CTCGCAGTTG CTGACGATTT CCTCAGCAAC
ATGCCGATTG TTGAAACAAA AAAAAGAGAT TCCATAAATG ATCCCATCAG TTCTGGACTC
GAAACTATTT ATGATGGGCC AATGGTTACT CTTGTAAATG AGGGGACAGC AAGTGCTAGT
GAAATTCTTG CTGGTGCTCT TCAGGATAAT AAAAGATCTG AACTCATAGG TAATAAAACT
TTTGGGAAAG GCCTCATACA ATCTTTGACC AATCTTAGTG ATGGCAGTGG TTTAGCTGTA
ACAGTTGCTA GTTATCTAAC TCCTAGTGGA AGAGACATAC AAAATCTTGG AATTGAGCCT
GATCGCCTCT TGGAAATGCC AGAGCCACTT AATCCAGGTT CTGATGACGA TAGATGGCTT
TTAGATGCAG AGCTGATCAT GCAAGCCACC TTGGACAAAG AAGAAGTCTC AGAAAAATTA
TCAAAAGAGA CTTTGGTAAA AGAAGAACAA TTAATAAGCC AAGAAATTGA ATAA
 
Protein sequence
MHCTFKYLTR CAPWSPQKIN PMLSTVKSLT KPLQRLFAVL ISFGILFQVF TQPAFALNDG 
QLLVIEAWNQ VNAGYLDPKK FDEIQWKKLR QKALEKPINN SQQAYSAIEA MLLPLGDPYT
RLLRPVDYEA MKKSNIGSEI NGVGLQLGAR KEDGDIVVIS PLEGSPASDA GITSGTIIKK
VNGQSPKQLG LEATAAKLRG QTGTQVIVEL EQPDNEIKEI SLERRSVDLR PVRTKRIRNE
SHTFGYLRIT QFSEGVPEQV KEALEELSGK EIDGLILDLR NNSGGLVSSG LAVADDFLSN
MPIVETKKRD SINDPISSGL ETIYDGPMVT LVNEGTASAS EILAGALQDN KRSELIGNKT
FGKGLIQSLT NLSDGSGLAV TVASYLTPSG RDIQNLGIEP DRLLEMPEPL NPGSDDDRWL
LDAELIMQAT LDKEEVSEKL SKETLVKEEQ LISQEIE