Gene NATL1_03531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_03531 
Symbol 
ID4779823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp325178 
End bp326200 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content37% 
IMG OID640083620 
Productputative oxidoreductase 
Protein accessionYP_001014182 
Protein GI124025066 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTTCCAAGAT CAACGAAAAT ATTATTCCTG TAAAAGTTGG CGTAATAGGA 
ATTGGGAATA TGGGGTGGCA TCATGCGAGA GTACTTAGTC TTCTCAAAGA TGCTGAGCTA
ATTGGAGTTG CGGATTTAGA CGAAGAACGA GGAAAGTTGG CTATGGAGCA ATTTAATTGT
AATTGGTATG GAAACTATAA GGATTTATTA CATCAAGTAG AAGCTGTATG TATTGCTGTA
CCTACGTTAT TTCACCATGA AGTTGGTCTA GAATGTCTAA AGTCTGGTAA ACATGTTTTA
ATTGAAAAAC CGATAGCAGC AAATAAAGAA GAAGCATCAT CTTTGATCAA TGCTTCAAAC
AATGCAAAAA AATTATTACA AGTTGGTCAT ATAGAAAGAT TTAATCCTGC ATTTAGAGAA
TTGACAAAAG TAGTTGCGAA TGAAGAAGTT GTAGTTCTTG AAGCAAGAAG GCATAGTCCT
CATCCCGAGA GAGCTAATGA TGTATCGGTC GTTTTAGACT TAATGATTCA TGATATTGAT
TTAGTTATTG AACTAGCAAA TTCAAAAGTA ATAAGGCTTG CTGCCGTTGG AGGATGCAGT
GGAGACGGAC CTATGGATTA CGTTAACGCA ACACTGGGTT TTCAAAACGG GGTGGTTGCA
AGTTTGACTG CAAGCAAAAT GAGTCACAAA AAAATCAGAA GTTTGAGCGC TCATTGCAAA
GAAAGTCTTA TTGAAACAGA TTTCCTAAAT CACAATATTC ACATCCATAG GAAGGCTCAT
GAATGGTATT CAGCTGATCA TGGAGAATTA CTTTATAGAA ACGATGGTTT TATTGAAGAA
GTGAGTACAA CATCAATTGA GCCGTTGTAT GCAGAACTGG AGCATTTTCT ACAATGCGTC
AGAGGGAAGG AGAAGCCAGC TGTAGACGGT CTTCAAGCTT CTAGAGCACT TCATCTGGCT
GATTTAATTG AAAAGGCAGT ATCAATACCA AGTGAAGACA TTTTGCTAAG CAAAGGGATC
TAG
 
Protein sequence
MKKISKINEN IIPVKVGVIG IGNMGWHHAR VLSLLKDAEL IGVADLDEER GKLAMEQFNC 
NWYGNYKDLL HQVEAVCIAV PTLFHHEVGL ECLKSGKHVL IEKPIAANKE EASSLINASN
NAKKLLQVGH IERFNPAFRE LTKVVANEEV VVLEARRHSP HPERANDVSV VLDLMIHDID
LVIELANSKV IRLAAVGGCS GDGPMDYVNA TLGFQNGVVA SLTASKMSHK KIRSLSAHCK
ESLIETDFLN HNIHIHRKAH EWYSADHGEL LYRNDGFIEE VSTTSIEPLY AELEHFLQCV
RGKEKPAVDG LQASRALHLA DLIEKAVSIP SEDILLSKGI