| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03421 |
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| Symbol | lytB |
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| ID | 4780362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 317009 |
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| End bp | 318214 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640083609 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001014171 |
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| Protein GI | 124025055 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.929228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACTC AAGCCTTTAA GCAAACTCTT CATAAATCGG ATCGTTATAA CCGAAGAGGA
TTTGGTTCAG CAAATAAGCG AGCTCAAGCA CTTGCTGAGG CTTATCAAAG TGGTTTAATT
GGATCTATTA GAGAAAATGG AAATCTTTTA GAGCACGGAA GATTAAAAGT TAAACTTGCA
GAAGCTTTTG GATTTTGTTG GGGAGTAGAA AGATCAGTAG CAATGGCTTA CGAGACTAGG
AAGCATTATC CAAATGAAAG AATATGGATC ACTAATGAAA TCATTCATAA CCCCTCTGTG
AATGATCATT TGAGGAAAAT GAATGTTCTT TTTATTTCTG AGGAAAAAGG GGTTAAAGAT
TTTTCAGTAG TAAAAGATGG AGATGTAGTA ATTCTTCCTG CATTTGGAGC AACGGTTCAA
GATATGAAGC TCTTACACGA TAGAGGTTGT CATATTATTG ATACCACTTG CCCATGGGTT
TCAAAAGTTT GGCATACAGT CGAAAAGCAT AAAAAACATA CATTCACATC AATTATTCAT
GGCAAATATA AACACGAAGA AACTCTAGCG ACTAGTTCTT TTGCAGGGAC TTACCTAGTC
CTATTTGACC TTGAAGAGGC GAATTATGTT TCTGATTATA TTTTAGGCAA GGGAAATAGA
GAAGATTTCT TAAAGCGTTT TTCAAAAGCT TCTTCAGCAG GGTTCGATCC CGATAAGGAT
TTGCAAAAAG TTGGAGTTGC TAATCAGACC ACAATGTTAA AAAGCGAAAC TGAGGAAATA
GGACGATTGT TTGAGAAAAC AATGTTGCAA AGATTTGGAC CTGCTCAATT GAATGAACAT
TTTCTAGCTA TTAATACCAT TTGTGATGCT ACTGAAGAAA GACAAGGAGC AATGTTTTCG
CTAGTTGATG AACCTCTTGA TCTTATGGTT GTAATTGGTG GATTCAATTC TTCTAACACA
ACTCATCTTC AAGAAATCGC AATCAGTAGA GGGATTCGTT CATTTCATAT TGATACTCCA
GAGAGAATTG GAGAAGAGAC TAATACCATT ACTCATATGC CTCTAGAGGG AGGTGAATTG
TTAACTGAGG AAAATTTTCT TCAAAACGGA AATATTAGTG TAGGTATTAC TTCGGGTGCT
TCAACTCCCG ACCGTGTAGT TGAAGATGTT ATTCACAAGC TAATGAAAAT AGGCGAAAAT
TTTTGA
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| Protein sequence | MDTQAFKQTL HKSDRYNRRG FGSANKRAQA LAEAYQSGLI GSIRENGNLL EHGRLKVKLA
EAFGFCWGVE RSVAMAYETR KHYPNERIWI TNEIIHNPSV NDHLRKMNVL FISEEKGVKD
FSVVKDGDVV ILPAFGATVQ DMKLLHDRGC HIIDTTCPWV SKVWHTVEKH KKHTFTSIIH
GKYKHEETLA TSSFAGTYLV LFDLEEANYV SDYILGKGNR EDFLKRFSKA SSAGFDPDKD
LQKVGVANQT TMLKSETEEI GRLFEKTMLQ RFGPAQLNEH FLAINTICDA TEERQGAMFS
LVDEPLDLMV VIGGFNSSNT THLQEIAISR GIRSFHIDTP ERIGEETNTI THMPLEGGEL
LTEENFLQNG NISVGITSGA STPDRVVEDV IHKLMKIGEN F
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