Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_03411 |
Symbol | amtB |
ID | 4780376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 315399 |
End bp | 316889 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640083608 |
Product | ammonium transporter |
Protein accession | YP_001014170 |
Protein GI | 124025054 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTG CTTTGCAATC GCCTCCAAGG CGAACTACTT CTCGTCTCCA AGATGCAAGT CTCTTGAACG GGCCAATGCT TCTTCTCAGA AGTATTAAAG GCTTTAGAAG GAGTCAGTCT TGGGCATGGC TAGCCTCTAT CCCATTGGCC CTTTTGGGAT TAGGTGTTTT CACTTTCTCT GCAAGAGCTG AGGTTGCTCT TTCAGATTTA ACAGGACCAC AAGCCGCTTC TTTCTTGGCT GACAACCTTT GGTTATTTAT AGCCACAATC CTCGTTATTT TTATGAACGC GGGATTCGCA ATGGTTGAAG CTGGTATGTG CCGTCAAAAA AATGCGGTCA ACATTCTAGC TAAAAATTTA TTTGTTTTTG CTCTTGCTGT TACTGCCTAC TGGGTAATTG GTTATTCATT AATGTATGGC GGTTCAGTTA TTGATGGATG GCTTTATTTC CAAGGCTTAT TCGTTGATCC TGACCCTTCA GGTGCACTTG AGTGTGCAGC CGCAGGAGAT ACAGGTTGTC TTGTCCCAGC AGTTGATTTC CTTTTCCAAT CTGCTTTTGC CGGCACTGCT GCAACGATCG TTTCGGGATT GGTTGCTGAG AGAGTCAAAT TCGGTGAATT TGTAGTTTTC TCTATAGTTT TGACTGCTTT TATCTATCCA ATTGCTGGAA GTTGGCAATG GAACGGTGGT TGGCTTGCTG AACTTGGTTT TATTGATTTC GCTGGTTCAT CCATTGTCCA CTCTGTTGGA GGATGGGCAG GTCTTGTTGG AGCAATGCTT CTTGGACCTC GTATTGGCAA ATTTGTTGAT GGCAAAGCTC AAGCGATGCC TGGACACAAT ATGGCCATTG CAACTTTAGG AGCACTAATC CTTTGGATTG GTTGGTATGG ATTCAACCCT GGCTCAGAAT TAGCTATGGA TCAATATGTT GCTTACGTTG CAGTTACAAC AACTTTGGCA GCAGCTGGTG GTGCAATCGC CGCTACAGTT CTATCTACCA TTACTTCTGG TAAGCCTGAT CTAACCATGA TCATTAATGG CATTCTTGCT GGATTAGTAA GTATCACTGC TGGTTGTGGC AATATGACTT TTGCTGGATC TTGGCTTGCT GGTGCTGTAG GTGGATTAAT CGTCGTAGTT GCAGTAGCTG CTCTGGATTC TGCAGGAATT GATGATCCAG TTGGTGCTTT CTCAGTTCAC GGTGTTTGTG GAGTTTGGGG AACTGTTGTT ATCGGCCTTT GGGGCGTTGA TGGCATGGAT CCTGGAGCTG CAGGAATTGG TCTTCTCAAT GGAGGAGGAA TTAACCAATT CTTCATTCAA GCATTAGGTG CAGCTGCTTA TGGCATATGG ACTGTTGTGA CATGCTGGAT TGCTTGGCAA ATTATTGGTG GCTTCTTCGG AGGTATCAGA GTTAGCGAAG CAGAAGAGAC ACAGGGACTT GATATTGGCG AGCATGGAAT GGAGGCTTAT CCTGACTTTG CTTCTAGCTA G
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Protein sequence | MTTALQSPPR RTTSRLQDAS LLNGPMLLLR SIKGFRRSQS WAWLASIPLA LLGLGVFTFS ARAEVALSDL TGPQAASFLA DNLWLFIATI LVIFMNAGFA MVEAGMCRQK NAVNILAKNL FVFALAVTAY WVIGYSLMYG GSVIDGWLYF QGLFVDPDPS GALECAAAGD TGCLVPAVDF LFQSAFAGTA ATIVSGLVAE RVKFGEFVVF SIVLTAFIYP IAGSWQWNGG WLAELGFIDF AGSSIVHSVG GWAGLVGAML LGPRIGKFVD GKAQAMPGHN MAIATLGALI LWIGWYGFNP GSELAMDQYV AYVAVTTTLA AAGGAIAATV LSTITSGKPD LTMIINGILA GLVSITAGCG NMTFAGSWLA GAVGGLIVVV AVAALDSAGI DDPVGAFSVH GVCGVWGTVV IGLWGVDGMD PGAAGIGLLN GGGINQFFIQ ALGAAAYGIW TVVTCWIAWQ IIGGFFGGIR VSEAEETQGL DIGEHGMEAY PDFASS
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