| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_02011 |
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| Symbol | holB |
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| ID | 4779168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 186200 |
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| End bp | 187159 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640083466 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001014030 |
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| Protein GI | 124024914 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.847421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAATT TTCAAAATAT ATGTGGGCAA GATTTAGCAA TTAAAATTTT AAAATCTGCT
ATTTCAAAAG AACATATTTC TCATGCTTAT TTATTTTCTG GTCCAGAGGG AGTTGGAAGA
AAAAAAACTG CTAAAATTTT CATTAAATCT ATTCTTGACC AAAATCAGGA AAAAAAAAGT
ACAAAAAGAA AAATAAATAA TAATAATCAT CCTGACTTAT TATGGGTAGA GCCATCTTAT
ATAGTCCAAG GTCAAAGTAT TTCTCAGACA AAAGCAATTT TAGATGGTAT AAGTATGAAA
TCGCCTCCGC AAATAAGGCT AAATCAAATT AAAGAAATAA TAGAATTTTT AGGGAAAAAG
CCATTTGAAT CAGAAAGAAG CATAGTAATA ATTGAGGATA TTGAAAGAAT AAATGAATCT
GCAGCAAATG CATTATTAAA AACTCTTGAA GAAACATGTA CAGGATTATT TATTCTTATC
ACACAAAGAC CAGAGAAATT ATTATCAACT ATTAGATCAA GATGTCAGAT AGTCCCATTC
ATACGCCTGA ATGATAATCA AGTAAACAAA ATTATTGAAA AATCAGAAGT TGTTCAAGAA
ATAGATGATA TTCCTAGTGA AAAAATTAAA GAATTAATAG ATTTCTCAAA TGGATCTCCA
GGGCGCTGTA TAGTGAATCT TCAATTTTGG TTATCTTTTT CAACTTCATT AAGACAAAAG
TTAGAAATCC AATTAAATAA TCCAATTGAG TTATTACAAT TAGCCAAGGA AATCACAGAT
GAACTAAACA TAGAGCAACA ACTATGGCTT ATTGATTTTC AACAGAATAG GGCATGGATA
AAAGAAAAAA ATTCAAATAT TGTTGTACAA CTTGAAGAGC TTAGAAAACA ATTATTGAAA
TTTGTGCAGC CTAGACTTGC TTGGGAAGTA ACTTTATTAG AAATAAACTT TCTTAATTAA
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| Protein sequence | MDNFQNICGQ DLAIKILKSA ISKEHISHAY LFSGPEGVGR KKTAKIFIKS ILDQNQEKKS
TKRKINNNNH PDLLWVEPSY IVQGQSISQT KAILDGISMK SPPQIRLNQI KEIIEFLGKK
PFESERSIVI IEDIERINES AANALLKTLE ETCTGLFILI TQRPEKLLST IRSRCQIVPF
IRLNDNQVNK IIEKSEVVQE IDDIPSEKIK ELIDFSNGSP GRCIVNLQFW LSFSTSLRQK
LEIQLNNPIE LLQLAKEITD ELNIEQQLWL IDFQQNRAWI KEKNSNIVVQ LEELRKQLLK
FVQPRLAWEV TLLEINFLN
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