Gene NATL1_01581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01581 
Symbol 
ID4781164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp154034 
End bp155212 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content34% 
IMG OID640083422 
Productserine protease 
Protein accessionYP_001013987 
Protein GI124024871 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGGAT TAGATGACAA CAGACTATTA ATAGGATCCC TAAAGTTACG TCAAAAAAAA 
TATTTTAAAA TTTTTGTTTT AGTTGTTCTT ATTTTTTTTA ACTTCCGATA TGAAACTCCT
CTTCATTCAA GTGAAGCTTC ACTGTTATCC CAAGAAAATC ACAATAAGCA ATCTTTCGTA
TCAAAAGCAT TAAATATTAG TGGGGATGCA GTGGTCACAA TTGAAACACA ACGTCAGGTT
TTATCTTCAA GTGAAGGTGT ATTTCCTCCT GGGATCTTAA ATGATCGATA TTTTGAACGA
TTCTTTGGTC TAAGAGGCCT GCAAGTTCCA CGATCTCGAA TTGAAAAAGG CCAAGGAAGT
GGAGTGATTT TTTCTAAAGA AGGTCTGGTC TTGACTAATG CTCATGTAAT AGAAAAAACT
GATCAATTAA TAGTGGGTTT ATCAGATGGA AGAAGAGTGC TTGGAAATGT TGTTGGAGAA
GATTCTTTAA CAGATCTTGC AGTTATAAAA CTCCAAGCAA AAGGTCCTTG GCCAACTGCC
CAATTAGGAA ACTCCGATAA TTTAAAAGTT GGTGATTGGG CAATTGCAGT TGGAAATCCT
TTTGGACTTG AAAATACGGT TACTCTTGGA ATCATTAGTA ATCTCAATAG AGATGTTGCT
CAATTAGGTA TATCCGACAA AAGAATAGAT CTCATTCAAA CTGATGCAGC TATTAATCCA
GGTAATTCTG GAGGACCATT ATTAAATTCT GTTGGAGAAG TGATTGGTAT TAATACTCTT
GTTCGCTCAG GACCAGGAGC AGGATTAGGT TTCGCAATTC CAATAAATAG AGCTAGAAAA
ATCGCCAAAG ATTTAATCAC CAGCGGGAGA GCCAAGCATC CCATGATCGG AGTAACACTT
TCAAGCAATA TCAAACAAAA AAGTAATTTT CTTTCCCAAA CAGAAGATGG AGCGATAATT
AAATATTTAA TGCCAAATGG TCCGGCCGAA AAAGGTGGAT TAAAAGTAAA TGATCTAATA
ATTTCAATCA ACAATGAAAA AATTTCAACT CCAGCAGATG TGGTAAAAAA AATTAATAAA
AATAATTTAC AATCAGCATT AAAAATTAAA ATACTTAGAG GGAATATAGA GTCTATAAAA
ATCATCAAAC CAGTTGATGT TTATGATCTT CAAGTATAA
 
Protein sequence
MHGLDDNRLL IGSLKLRQKK YFKIFVLVVL IFFNFRYETP LHSSEASLLS QENHNKQSFV 
SKALNISGDA VVTIETQRQV LSSSEGVFPP GILNDRYFER FFGLRGLQVP RSRIEKGQGS
GVIFSKEGLV LTNAHVIEKT DQLIVGLSDG RRVLGNVVGE DSLTDLAVIK LQAKGPWPTA
QLGNSDNLKV GDWAIAVGNP FGLENTVTLG IISNLNRDVA QLGISDKRID LIQTDAAINP
GNSGGPLLNS VGEVIGINTL VRSGPGAGLG FAIPINRARK IAKDLITSGR AKHPMIGVTL
SSNIKQKSNF LSQTEDGAII KYLMPNGPAE KGGLKVNDLI ISINNEKIST PADVVKKINK
NNLQSALKIK ILRGNIESIK IIKPVDVYDL QV