| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_01571 |
|---|
| Symbol | |
|---|
| ID | 4780513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 152293 |
|---|
| End bp | 154011 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640083421 |
|---|
| Product | ABC transporter, ATP binding component |
|---|
| Protein accession | YP_001013986 |
|---|
| Protein GI | 124024870 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCGAC TAGAGAAGAT TAGTAAAATT TATCCCACTG GCGAAGTCTT GAAAGATGTC
AGTTGGGAAA TTAGAAATGG AGAGAGAATT GGTTTGGTTG GAGTCAATGG AGCAGGAAAA
TCAACACAAT TAAAAATTAT TGCTGGATTA GAAGAAGCAA CTGATGGATC TTTGATTAGC
GAAGGGGATC CATCTATTGC ATATTTAAAA CAGGAATTTG ATGTTGATCT TTCAAGAACT
GTTAGAGAAG AGTTATTTGC TGCATTTAAA GAAGCATCTG ATTTACTTCA CAGTCAAAAA
TTAGTTCAAG AAAAAATGGA ATCTGAATTA GCTTCTAAAG ATTTAGATTA CCTAGATTTA
TTAATCAAAG AATTAAGCGT GATTCAAAGC AAATTTGAAT CAATAAATGG TTACGATTTA
GAATCTAAAG TTGAAAAGTT ATTACCCACT ATTGGTTTCA ATCAAAATGA AGCAGACAGA
CTAGTTGGAG ACTTCTCGGG TGGCTGGCAG ATGAGAATAG CTTTAGGAAA AATCCTATTA
CAAAGTCCTG ATTTATTGTT ACTTGATGAA CCAACTAATC ATTTAGATTT AGAAACGATT
GAATGGCTAG AGAATTATTT ACTTAATCAG AAAATTGCTA TGGTAATTGT TAGCCATGAT
AGATCTTTCT TAGATAAAAT TTGTACGAGA ATTGTTAATA CCGAGCGAGG TAAATCTAAA
AGCTATCTTG GAAATTATAC GTCATATCTT CAACAGAGAG ATTTTGAATT GGAATCAACA
AAAGTTGCAT ACGAGAAACA ACAGAAGGAT ATACAAGTTC AAAAGGCATA TATAGAAAGA
TTTCGAGCAA GTGCTACAAG AAGTACACAA GCTAAAAGTA GAGAAAAGTT ATTAGATAAA
GTTGAAAAGA TAGAAGCTCC TGAGAATAAC TTAAAAGGAC CTAATTTTAA ATTTTTGGAA
GCACCACGTG CTGGTAGGGA TATCTTAAAT ATTAAGGATT TAACCCATAG CTATGAAGAT
AATATTTTAT TTTTAGGAGC CTTTTTAGAG CTTGAGCCAG GCGAAAGAAT AGCATTTTTA
GGTCCAAATG GTTCTGGGAA ATCTACTTTA TTGCGACTAA TTATGGGGTT AGAAGAACCT
GATGAAGGAT CTATTACGAT AGGAAAATAT AATATTATAC CTAGTTATTT TGAACAAAAT
CAAGCAGAGG CCTTAGAGTT AGAAAAAACA GTAATTGAGA CAATTTCTCA ATCTGTACCT
GATTGGACAC AAACAGAAAT TCGTTCTTTA CTGGGTAGCT TTGGTTTAAC TAATGATTCG
GTTTTTAAGG AGGTCAGTCA GATTAGTGGA GGAGAGAAAG CAAGACTTGC TTTAGCTTTA
ATGATTATTA AGCCGTCAAA TTTGCTTATT CTTGATGAAC CGACAAATCA TTTAGATATA
CCTTCAAAGC AAATGCTAGA GCAGGCATTA TCCAATTATA ATGGCACTGC ATTAATAGTT
TCTCATGATC GATATTTTAT TTCAAAAGTT GCAAACAAAA TTGTAGAAAT AAGAGATGGT
CAATTAATTA AGTATCAAGG TGATTACAAA TACTATAAAG AGAAAAAAAT CGAAGAATCA
CAAGAAAAAG AAAAAGAATT ACAATTAGCT GAAAGGGAAA GAAAAAGGTT GGCTAATCGA
GAAAAACAGC GTAGGAAGAA GAAAACTAAA CAAAAATAA
|
|---|
| Protein sequence | MLRLEKISKI YPTGEVLKDV SWEIRNGERI GLVGVNGAGK STQLKIIAGL EEATDGSLIS
EGDPSIAYLK QEFDVDLSRT VREELFAAFK EASDLLHSQK LVQEKMESEL ASKDLDYLDL
LIKELSVIQS KFESINGYDL ESKVEKLLPT IGFNQNEADR LVGDFSGGWQ MRIALGKILL
QSPDLLLLDE PTNHLDLETI EWLENYLLNQ KIAMVIVSHD RSFLDKICTR IVNTERGKSK
SYLGNYTSYL QQRDFELEST KVAYEKQQKD IQVQKAYIER FRASATRSTQ AKSREKLLDK
VEKIEAPENN LKGPNFKFLE APRAGRDILN IKDLTHSYED NILFLGAFLE LEPGERIAFL
GPNGSGKSTL LRLIMGLEEP DEGSITIGKY NIIPSYFEQN QAEALELEKT VIETISQSVP
DWTQTEIRSL LGSFGLTNDS VFKEVSQISG GEKARLALAL MIIKPSNLLI LDEPTNHLDI
PSKQMLEQAL SNYNGTALIV SHDRYFISKV ANKIVEIRDG QLIKYQGDYK YYKEKKIEES
QEKEKELQLA ERERKRLANR EKQRRKKKTK QK
|
|---|
| |