Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_01481 |
Symbol | citT |
ID | 4780027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 145799 |
End bp | 147616 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640083412 |
Product | DASS family sodium/sulfate transporter |
Protein accession | YP_001013977 |
Protein GI | 124024861 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGA TATCCACTGT CTTAGATAAT CCCAAAGCTG TCATAACTTT GGCAGTGTTA ATTATTGCTG TTTTTTTGTT CGTAAGCAGT GCTCTAGCTC CTGAGCTGAC TGGACTTTTG AGCGTTGCAT TATTGATGGC TACAGGAGTT CTCTCCCCTC AAAAAGCATT GGCTGGTTTT GGAAGCCCAG CGTTGATTAC ATTGATGGGT TTATTTGCTG TTTCTGCTGC ACTTTTTAAA AGTGGTGCCC TTGATCGTTT AAGGGAGTTA ATTGCTTCTG AAAGTATTCG AACGCCGCGC AGATTGATAG CTTTGCTCGG ATTAGTTGTT GCTCCTGTCT CAGGTGTTGT TCCCAATACC CCTGTGGTTG CTTCACTTTT ACCAGTAATC GAAGCTTGGT GCGTCAAGCG AAAACTATCT CCATCACGTG TATTGTTACC ATTATCTTTC GCGACAGTAT TAGGTGGCAC TTTAACTCTT TTAGGCAGTT CAGTGAATTT GTTGGTCAGC GATATTAGTG ATCAACTTGG TTACGGTCCC TTTGATTTAT TTACTTTTAC AGCAATAGGA GTACCTATAT GGTTATTTGG GACAGCATAT ATGTTGCTGG CTCCACAATC TCTATTGCCA GATAGAGGGA GAATTAGCTC AGAGTATGGA GGAAGTTCGG ATCAAACTGG TTATTTTACC GAAGTCACAA TTCCTTCTGA TTCTGAACTT GTTGGACATT CATTGAGAAA TAGCCGCTTA CAAAGAAGAT TTGATGTTGA TGTTCTAGAA ATACAGCGAG AAAATGAAAT ACTTTTACCC CCTTTAGCCG ATCGGATAAT TCAGTCTGGT GATCGGTTGT TGATAAGAAT TACGCGCTCT GATCTTTTGC GTTTAAAACA AGAACATACT GTTCAGTTAA ATAAAAACTT AAATATTGAA AAAAATTTTT TTCTGTCCAA CATTGATGAA AGTCAACAAA CGGTAGAGGT TCTTTTGCCA GCTGGTTCAA CCTTGGCTGG GGCAAGTTTG CGTGAACTGC GATTTAGACA AAGACACAAT GCTACTGTTT TGGCCTTACG ACGGGGTCAG CAAACTGTTC AAGAGAGATT GGGACAAGCA ATTTTGAGAG AAGGAGACGT ATTACTCTTA CAAGCTCCAA GAGATTCAAT TCGTGGATTA CAGGATAGTA ATGACCTTCT TGTTTTAGAT CAATTTGAGA ATGATCTACC CACTGTTACA AGAAAACCGA TAGCAATTGG CATCGCAATC GCAATGTTGA TTATTCCCTC AATTACTGAC TTGCCTCTAG TAGCTTCAGT TCTAATGGCA GTGATTGCTA TGGTCTGGGG AGGATGTTTA AGACCCGCAG AGGTACAAAG ATCAATCCGA CTTGACGTCA TTCTTTTGCT GGGATCTCTT TCAAGTTTTA GTGTCGCAAT GCAGACCACT GGTCTTGCTG ATGCTTTTGC CAATATTTTA ATTTTAATAT TGAAAGACTT ATCTACTTAT TCCGCCTTAC TAGTAATTTT CCTCTCTACT ACAATATTTA CTCAATTTGT TAGTAATGCT GCTTCAGTGG CTCTTTTGGC GCCAATTGCT GTTCAATTGG CCCCAAGTAT GGGGCTACCT CCTTTGGCTT TATTGATAAC AGTTCTTTTT GGCGCCAGTC AATCTTTTCT TACTCCTATG GGTTACCAGA CAAACCTTAT GGTATTTGGC CCTGGGCGTT ATCAGTTTTT AGATGTCACC AGATACGGAG CTGGGTTGAC CATCTTGATG ACGCTTCTTG TCCCTGGGTT GATATTGCTA AAGTATGGTA TTTCTTAA
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Protein sequence | MNEISTVLDN PKAVITLAVL IIAVFLFVSS ALAPELTGLL SVALLMATGV LSPQKALAGF GSPALITLMG LFAVSAALFK SGALDRLREL IASESIRTPR RLIALLGLVV APVSGVVPNT PVVASLLPVI EAWCVKRKLS PSRVLLPLSF ATVLGGTLTL LGSSVNLLVS DISDQLGYGP FDLFTFTAIG VPIWLFGTAY MLLAPQSLLP DRGRISSEYG GSSDQTGYFT EVTIPSDSEL VGHSLRNSRL QRRFDVDVLE IQRENEILLP PLADRIIQSG DRLLIRITRS DLLRLKQEHT VQLNKNLNIE KNFFLSNIDE SQQTVEVLLP AGSTLAGASL RELRFRQRHN ATVLALRRGQ QTVQERLGQA ILREGDVLLL QAPRDSIRGL QDSNDLLVLD QFENDLPTVT RKPIAIGIAI AMLIIPSITD LPLVASVLMA VIAMVWGGCL RPAEVQRSIR LDVILLLGSL SSFSVAMQTT GLADAFANIL ILILKDLSTY SALLVIFLST TIFTQFVSNA ASVALLAPIA VQLAPSMGLP PLALLITVLF GASQSFLTPM GYQTNLMVFG PGRYQFLDVT RYGAGLTILM TLLVPGLILL KYGIS
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