Gene NATL1_01291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01291 
Symbol 
ID4779612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp125170 
End bp127158 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content33% 
IMG OID640083393 
ProductABC transporter, ATP binding protein 
Protein accessionYP_001013958 
Protein GI124024842 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAT CAATTTCGAA AGCTCAAAAA GGACTAGTAA GCCAACTAAT TAAATTACGA 
AAGCTTACTC AGCCATATTT TCTACCTTAT ACAAAAAACA ATGGTTGGCT ATTTGTCTAT
TTATTAATAG CTTTATTATT TTGCGTAGGC GGAACAGTTC TGTTTTTACT CACAGGTTTG
ATGAGCCTGT TAACCAATTT AGCTCCAGAG GTAACCAACC AATTTTTAGG AGGAGTTCAA
AATTCCTTAA AAGTGATTTG GAATGGTCCG TCGGGAATAA TAATTTCAAG CTTGTTTGCC
TTAGGAATTT TTTCATTTAT CACAGTTCGT GGTCAGTTAA GGCAAAGGAG ATGGCTTCCT
TGGCTATTAC TAGGAGTAAT TATATTGATG CTATTGTCTG TCAATGGAAT TAATGCTGGA
ATTACATTTC TTGTTAGAGA TATCACTAAT GCATTAATAC AAAAAGATGA AAGTGAAAGT
TATAAAAATT TGTGGATTCT TGGAATTTGT TTTATTGCAG CACTTCCAAT AAGAAGCTTC
CAATTTTATT TTTCAGCAAA ACTACAGCTC TTATGGAGAG AGTGGTTATC CAAAAGCCTA
ATAACAGACT ATTTAGATGA CAGGACATAT TATATATTAA ATCCCAACGA TGAATCTGAA
ACGAATGTCG ATAATCCGGA TCAAAGAATT ACAGAAGATG CAAGAGACTT TACTGCGCAA
ACAATTGATC TATCGTTAAA TATTTTTGAT TCTTTATTAG TATTTTCACT AAACATTTTT
ATTTTACTAA GTATAAGTAA AGAACTAACA CTTGCCCTAA TTGTTTATGC CACATTAGTT
TCATCTTTAC TACTTTTTGC GAGTAGAAAG CTATTTAAAT TAAATTATGA TCAATTAAGA
TTTGAAGCTG ATTTTCGTTA CGGTCTTGTT CATGTAAGAA ACAATGCAGA ATCAATTGCT
TTTTACTCTG GTGAAAATCA AGAAGAAAAA GAAGTAAGTA GAAGGCTAAA ATCTGTAGTT
GATAACTTTA ATCTTTTAAT AATATGGGAA GCATTATTAA GAGTGCTCCA ACGCTCTGGA
ATTTATGGAA GTGTCTTTAT TCCTTTCATT ATTCTCGCAG GACCAATTCT TAGCGGCCAA
ATGGACTATG GAAGTTTTCA ACAAGCAAAT CTGAACTACA ACCTTCTTGA AGGTTCATTA
TTTTTTATTA TTTACAAAAT AGAGGCTTTA GCTAGATTTT CAGCTTCGAT AGGAAGACTT
GAAGGATTTC AATCAAACAT GAATGAGATC AGAAACAATC AATTTGAGGA CTTTAAAGTA
GAAATTAAAA ACAATGATTC TATAATTCTC AAAAATGTAA GTATTAAAAC CCCTGGAAAA
GATAATTACC TAATTAATAA TTTAAATCTA AGTCTGGAGA CAGGTCAAAG TGTACTTGTA
GTAGGACCTT CTGGTTGCGG TAAAACGTCT TTACTTAGAG CTATTAGCGG TCTATGGGCA
ATTCAATCTG GTGAGATAGA AACCCCCTCA AATGGTGAGT TACTTTTTAT TCCACAAAAA
CCATATATGA CTCTTGGCTC ATTGAGAGAA CAGCTTTGTT ACCCATTAGA TAAAAACAGA
TTCAGTGATG ATCATCTAAA AGCCGTTTTA GAAGAAGTCA AGTTACCTCA AATTATCCAA
AGGTATCCTG ATCTAGATAT CAAACAAGAT TGGCAAAGAC TATTATCTCT CGGAGAGCAA
CAAAGGCTTG CTTTCGCAAG ACTTTTGCTG AATTCCCCTA AATATGTTGT TTTAGATGAA
GCAACAAGTG CATTAGATGT AAATACAGAA AAACATCTTT ATGAACTTCT TAACAAACGC
GAAATGGCTT GCATTAGCGT AGGTCATAGG CCAACCTTGA AGAACTATCA TGAAAATGTG
CTTGAAATAA CTGAGAACAA AGGTTGGCGA TTATTGCCTG CTGCAAGTTA CCAATTTACT
GAGAACTAG
 
Protein sequence
MTSSISKAQK GLVSQLIKLR KLTQPYFLPY TKNNGWLFVY LLIALLFCVG GTVLFLLTGL 
MSLLTNLAPE VTNQFLGGVQ NSLKVIWNGP SGIIISSLFA LGIFSFITVR GQLRQRRWLP
WLLLGVIILM LLSVNGINAG ITFLVRDITN ALIQKDESES YKNLWILGIC FIAALPIRSF
QFYFSAKLQL LWREWLSKSL ITDYLDDRTY YILNPNDESE TNVDNPDQRI TEDARDFTAQ
TIDLSLNIFD SLLVFSLNIF ILLSISKELT LALIVYATLV SSLLLFASRK LFKLNYDQLR
FEADFRYGLV HVRNNAESIA FYSGENQEEK EVSRRLKSVV DNFNLLIIWE ALLRVLQRSG
IYGSVFIPFI ILAGPILSGQ MDYGSFQQAN LNYNLLEGSL FFIIYKIEAL ARFSASIGRL
EGFQSNMNEI RNNQFEDFKV EIKNNDSIIL KNVSIKTPGK DNYLINNLNL SLETGQSVLV
VGPSGCGKTS LLRAISGLWA IQSGEIETPS NGELLFIPQK PYMTLGSLRE QLCYPLDKNR
FSDDHLKAVL EEVKLPQIIQ RYPDLDIKQD WQRLLSLGEQ QRLAFARLLL NSPKYVVLDE
ATSALDVNTE KHLYELLNKR EMACISVGHR PTLKNYHENV LEITENKGWR LLPAASYQFT
EN