Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_01291 |
Symbol | |
ID | 4779612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 125170 |
End bp | 127158 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640083393 |
Product | ABC transporter, ATP binding protein |
Protein accession | YP_001013958 |
Protein GI | 124024842 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.103096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCAT CAATTTCGAA AGCTCAAAAA GGACTAGTAA GCCAACTAAT TAAATTACGA AAGCTTACTC AGCCATATTT TCTACCTTAT ACAAAAAACA ATGGTTGGCT ATTTGTCTAT TTATTAATAG CTTTATTATT TTGCGTAGGC GGAACAGTTC TGTTTTTACT CACAGGTTTG ATGAGCCTGT TAACCAATTT AGCTCCAGAG GTAACCAACC AATTTTTAGG AGGAGTTCAA AATTCCTTAA AAGTGATTTG GAATGGTCCG TCGGGAATAA TAATTTCAAG CTTGTTTGCC TTAGGAATTT TTTCATTTAT CACAGTTCGT GGTCAGTTAA GGCAAAGGAG ATGGCTTCCT TGGCTATTAC TAGGAGTAAT TATATTGATG CTATTGTCTG TCAATGGAAT TAATGCTGGA ATTACATTTC TTGTTAGAGA TATCACTAAT GCATTAATAC AAAAAGATGA AAGTGAAAGT TATAAAAATT TGTGGATTCT TGGAATTTGT TTTATTGCAG CACTTCCAAT AAGAAGCTTC CAATTTTATT TTTCAGCAAA ACTACAGCTC TTATGGAGAG AGTGGTTATC CAAAAGCCTA ATAACAGACT ATTTAGATGA CAGGACATAT TATATATTAA ATCCCAACGA TGAATCTGAA ACGAATGTCG ATAATCCGGA TCAAAGAATT ACAGAAGATG CAAGAGACTT TACTGCGCAA ACAATTGATC TATCGTTAAA TATTTTTGAT TCTTTATTAG TATTTTCACT AAACATTTTT ATTTTACTAA GTATAAGTAA AGAACTAACA CTTGCCCTAA TTGTTTATGC CACATTAGTT TCATCTTTAC TACTTTTTGC GAGTAGAAAG CTATTTAAAT TAAATTATGA TCAATTAAGA TTTGAAGCTG ATTTTCGTTA CGGTCTTGTT CATGTAAGAA ACAATGCAGA ATCAATTGCT TTTTACTCTG GTGAAAATCA AGAAGAAAAA GAAGTAAGTA GAAGGCTAAA ATCTGTAGTT GATAACTTTA ATCTTTTAAT AATATGGGAA GCATTATTAA GAGTGCTCCA ACGCTCTGGA ATTTATGGAA GTGTCTTTAT TCCTTTCATT ATTCTCGCAG GACCAATTCT TAGCGGCCAA ATGGACTATG GAAGTTTTCA ACAAGCAAAT CTGAACTACA ACCTTCTTGA AGGTTCATTA TTTTTTATTA TTTACAAAAT AGAGGCTTTA GCTAGATTTT CAGCTTCGAT AGGAAGACTT GAAGGATTTC AATCAAACAT GAATGAGATC AGAAACAATC AATTTGAGGA CTTTAAAGTA GAAATTAAAA ACAATGATTC TATAATTCTC AAAAATGTAA GTATTAAAAC CCCTGGAAAA GATAATTACC TAATTAATAA TTTAAATCTA AGTCTGGAGA CAGGTCAAAG TGTACTTGTA GTAGGACCTT CTGGTTGCGG TAAAACGTCT TTACTTAGAG CTATTAGCGG TCTATGGGCA ATTCAATCTG GTGAGATAGA AACCCCCTCA AATGGTGAGT TACTTTTTAT TCCACAAAAA CCATATATGA CTCTTGGCTC ATTGAGAGAA CAGCTTTGTT ACCCATTAGA TAAAAACAGA TTCAGTGATG ATCATCTAAA AGCCGTTTTA GAAGAAGTCA AGTTACCTCA AATTATCCAA AGGTATCCTG ATCTAGATAT CAAACAAGAT TGGCAAAGAC TATTATCTCT CGGAGAGCAA CAAAGGCTTG CTTTCGCAAG ACTTTTGCTG AATTCCCCTA AATATGTTGT TTTAGATGAA GCAACAAGTG CATTAGATGT AAATACAGAA AAACATCTTT ATGAACTTCT TAACAAACGC GAAATGGCTT GCATTAGCGT AGGTCATAGG CCAACCTTGA AGAACTATCA TGAAAATGTG CTTGAAATAA CTGAGAACAA AGGTTGGCGA TTATTGCCTG CTGCAAGTTA CCAATTTACT GAGAACTAG
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Protein sequence | MTSSISKAQK GLVSQLIKLR KLTQPYFLPY TKNNGWLFVY LLIALLFCVG GTVLFLLTGL MSLLTNLAPE VTNQFLGGVQ NSLKVIWNGP SGIIISSLFA LGIFSFITVR GQLRQRRWLP WLLLGVIILM LLSVNGINAG ITFLVRDITN ALIQKDESES YKNLWILGIC FIAALPIRSF QFYFSAKLQL LWREWLSKSL ITDYLDDRTY YILNPNDESE TNVDNPDQRI TEDARDFTAQ TIDLSLNIFD SLLVFSLNIF ILLSISKELT LALIVYATLV SSLLLFASRK LFKLNYDQLR FEADFRYGLV HVRNNAESIA FYSGENQEEK EVSRRLKSVV DNFNLLIIWE ALLRVLQRSG IYGSVFIPFI ILAGPILSGQ MDYGSFQQAN LNYNLLEGSL FFIIYKIEAL ARFSASIGRL EGFQSNMNEI RNNQFEDFKV EIKNNDSIIL KNVSIKTPGK DNYLINNLNL SLETGQSVLV VGPSGCGKTS LLRAISGLWA IQSGEIETPS NGELLFIPQK PYMTLGSLRE QLCYPLDKNR FSDDHLKAVL EEVKLPQIIQ RYPDLDIKQD WQRLLSLGEQ QRLAFARLLL NSPKYVVLDE ATSALDVNTE KHLYELLNKR EMACISVGHR PTLKNYHENV LEITENKGWR LLPAASYQFT EN
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