Gene NATL1_00241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_00241 
Symbol 
ID4780752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp26760 
End bp27836 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content34% 
IMG OID640083287 
Productcyclophilin-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001013853 
Protein GI124024737 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAA AGATTTGCAT TCTTGCCCTG ATAACAATCC TATTTTCTTT AGGATCTCCA 
TGGGTTAACC CTGCTTTTGC AAGTCTTCCT AATGGTAATC GATTGAAAGA TCCATACGCA
ATATTAAGAA ATTCTTTACC GATTGACCAA AAAGAATTGC GTGAATTACA AAACAAACTA
GAAGAGACCA GTGAAGATCT TCGAGGAAGT CGATGGTCAG CTATCAGCAA AGCCACTTCA
AGAAGTCAAT TTTTAGTAAG TAACAAAAAA AATCAAATTC TTGACTCAAT GCCGGCGGAA
AATAAAGAAA ATGCGTCTAA TTTACTTTCT AATTTAAAAG AAGAGCTTGA TGAGTTAGGG
CAAATAGCGA ACGAAAAAAA TAAAGTCTCA TTTCTTGACG TAAGGCGTCA AAGCTTAAAA
ACAATTGATG ATATTGAATC TCTTCTTATT ACAAAAAACT TCCCATATCA AATACCCAGT
GAATATAATC ATTTACCAAG ACTTTTAGGT AGAGCAAATG TAGAAATTAA AACATCAAAA
GGAAGTATGA ATGCAATTAT TGATGGTTAC AATGCTCCAC TTACAGCTGG TGCTTTTATA
GATCTTTCAA TGAAAGGTTT TTACGATGGT TTACCAATCA ATAGAGCTGA AGAGTTTTTT
ATTCTTCAAA CTGGGGATCC TAAAGGAGAA ACGATTGGAT ATATAGATCC TGATAATAAT
GAGTTGAGAA GAGTTCCATT AGAAATAAGA ACATCTAGCT TGGAAGATAC ACTTTATGGA
GAAACTTTTG AAGACGTTGG TCTTTACACT GAGACCCCAG TACTTCCATT TGCAACTTTA
GGAACACTTG GCTGGGCGCA CTCTGACACT GATTTAAATG ATGGTTCGTC GCAGTTTTTC
TTCTTCTTAT ACGAAGCCGA ATTAAATCCA GCTGGACGTA ATCTTATTGA TGGAAGAAAT
GCAGCTTTTG GCTACGTAAT AGAAGGTTCA GAAATATTAA ATAAACTTGG AGTAGATGAT
AAAATCATAT CGATTACAGT ATTAAATGGT TCAGAAAATC TAAAACTCAA AGCTTAA
 
Protein sequence
MAKKICILAL ITILFSLGSP WVNPAFASLP NGNRLKDPYA ILRNSLPIDQ KELRELQNKL 
EETSEDLRGS RWSAISKATS RSQFLVSNKK NQILDSMPAE NKENASNLLS NLKEELDELG
QIANEKNKVS FLDVRRQSLK TIDDIESLLI TKNFPYQIPS EYNHLPRLLG RANVEIKTSK
GSMNAIIDGY NAPLTAGAFI DLSMKGFYDG LPINRAEEFF ILQTGDPKGE TIGYIDPDNN
ELRRVPLEIR TSSLEDTLYG ETFEDVGLYT ETPVLPFATL GTLGWAHSDT DLNDGSSQFF
FFLYEAELNP AGRNLIDGRN AAFGYVIEGS EILNKLGVDD KIISITVLNG SENLKLKA