Gene NATL1_00071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_00071 
Symbol 
ID4780160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp10620 
End bp11342 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content37% 
IMG OID640083270 
Producthypothetical protein 
Protein accessionYP_001013836 
Protein GI124024720 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTCCT CTCCCAAAGA AGATCTTACC CTTGGCTCAA GGCTTCAGCA AGATCTTAAA 
AATGACCTAA TAGCTGGTCT ATTGGTGGTT ATTCCCTTAG CTACCACTAT TTGGTTGTCT
ACAATTGTCA GCCGCTTTGT TTTGGCAATA TTAACCTCAA TACCAAAACA ATTAAATCCT
TTCATTACTC TTAATCCTTT ACTGCAAGAC CTTATCAACC TCGCTTTGGG TTTAACTGTT
CCACTACTAG GAATTTTGTT GATAGGTCTC ATGGCTAGAA ATTTTGTAGG AAGATGGTTG
CTTGAGTTTG GCGAAGGAAC TCTATCTCGA ATACCACTTG CGGGATCAGT TTATAAAACT
CTTAAACAAC TTCTAGAAAC TTTTTTAAGA GACAATTCAA CTAGATTTCG CAGAGTTGTA
TTAGTTGAAT ATCCGAGAGA AGGTTTGTTC AGCGTTGGTT TTGTGACTGG TATTGTTGGC
CCATCTCTAC AAACGGAACC AAATCAACCT TTGTTGAGTG TTTTTATACC TACTGCACCA
AACCCTACAA CTGGTTGGTA TACATTAGTG CCAGAAGACT CTGTTAAAGA TTTAGATATA
TCTGTTGAAG ATGCTTTTAG AACCATTATT TCTGCTGGAA TTGTAAATCC TGATGATAGA
AGTAACTCTA CAAATACATC TTTTTCTAGT TTATTTTCTC AGTTAAGAGC ATCATCTTCG
TAA
 
Protein sequence
MQSSPKEDLT LGSRLQQDLK NDLIAGLLVV IPLATTIWLS TIVSRFVLAI LTSIPKQLNP 
FITLNPLLQD LINLALGLTV PLLGILLIGL MARNFVGRWL LEFGEGTLSR IPLAGSVYKT
LKQLLETFLR DNSTRFRRVV LVEYPREGLF SVGFVTGIVG PSLQTEPNQP LLSVFIPTAP
NPTTGWYTLV PEDSVKDLDI SVEDAFRTII SAGIVNPDDR SNSTNTSFSS LFSQLRASSS