Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_00001 |
Symbol | dnaN |
ID | 4780657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 188 |
End bp | 1348 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640083263 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001013829 |
Protein GI | 124024713 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAA ATTGTTCTCA ATCTGAATTA AATAATGCTC TTCAATTGGT TAGTAGAGCT GTTTCTAATC GACCGACGCA CCCTGTATTA GCTAATGTTT TGCTCGCTGC TGATGAGGTA ACTGGAAAAC TTCGCCTAAC TGGTTTTGAC TTAAGTTTAG GAATACAAAC TTCAATATCT GCTTCTATAG AGAGCAGTGG TGCCATAACT TTGCCTGCTA AGTTATTTGG TGAAATTGTT TCGAAATTAT CTAACGACTC ACCTCTAGTT CTGACATCAG ATGAAACTAG TCAACAAGTC GAGTTGACTA GTAAAAGTGG AACGTATCAA GTAAGAGGGA TGGTGTCTGA TGATTTTCCT GATTTACCTT TGGTAGAAAG CGGTAATTCA TTTAAATTGA ATCCATTATT ATTATCTAAT GCAATTAAAT CAACTTTATT TGCAAGCAGT ACTGATGAGG CTAAACAATT ACTTACTGGT GTTAATCTTA CTTTTGACGG ATATGGGATT GAATCTGCAG CAACTGACGG ACATAGATTA GCTGTTCTTA ATTTAAATAA TATATTATCT GATTCAAAAG AGATAGATAG TTCTACTAAA TTCGAAAAAT TTTCTATTAC ATTACCTTCC AAATCTTTAA GAGAAGTGGA AAAATTTTTA AGTACTTGTG ATATTAGTCA GCCAATTAAT TTTTTTGTTG ATAAAGGACA AGTAGTTTTT ATATCAGTAG AAGATATTAT AACTATAAGA GCTTTAGAAG GTTCTTATCC AAATTATTCG CAATTATTAC CTGATACTTT TGAAAATGAA TTAGAGTTTG ATAGGAAAGA ATTTATATCT TCATTAGAAC GAATTGCTGT TTTAGCAGAT CAGCATAATA ATGTTATAAA GGTAACGACT GACGGCTCTG CAAATTTAAT CAAAATTAGT ACGGATGCCC AAGATATTGG AACAGGTTAT GAGTCACTAC CTGTCTCTTA TAAAGGGGAT TCATTTCAAA TAGCATTTAA TGTTAGATAT TTATTAGATG GACTTAAAGT CATAGATTCA AACTTGATTA AATTAAGTTG TAATTCTCCA ACTACACCTG CGGTTTTCTC ACCTATTAAT AGTGACGTTA ATTTCACTTA TCTAGTAATG CCCATACAAA TACGAAATTA A
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Protein sequence | MKLNCSQSEL NNALQLVSRA VSNRPTHPVL ANVLLAADEV TGKLRLTGFD LSLGIQTSIS ASIESSGAIT LPAKLFGEIV SKLSNDSPLV LTSDETSQQV ELTSKSGTYQ VRGMVSDDFP DLPLVESGNS FKLNPLLLSN AIKSTLFASS TDEAKQLLTG VNLTFDGYGI ESAATDGHRL AVLNLNNILS DSKEIDSSTK FEKFSITLPS KSLREVEKFL STCDISQPIN FFVDKGQVVF ISVEDIITIR ALEGSYPNYS QLLPDTFENE LEFDRKEFIS SLERIAVLAD QHNNVIKVTT DGSANLIKIS TDAQDIGTGY ESLPVSYKGD SFQIAFNVRY LLDGLKVIDS NLIKLSCNSP TTPAVFSPIN SDVNFTYLVM PIQIRN
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