Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_16381 |
Symbol | ccdA |
ID | 4720512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1430865 |
End bp | 1431521 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640081330 |
Product | putative c-type cytochrome biogenesis protein CcdA |
Protein accession | YP_001011952 |
Protein GI | 123966871 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0785] Cytochrome c biogenesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAAG GGCTTAATAA TCCAGGCCCG TTTACAATAT TTTTGGTATT TACAGCAGGC CTTTTAACCA GTCTTGGCCC ATGTTCTTTA TCTTTACTGC CAATCACAAT TGCGTATATT GGTGGAACAA AGAAAAATAA ATTTAAACTT ATAAGTTTTT CTGGCGGAGT TATTTTTTCG CTAGTTACTT TAGGAGCATT AAGTGGATTC TTAGGGAAAA TATATGGTCA ATTACCCTCT TATTACTCTT CTTTAGTTGC TTTCATAGCA ATAATTATGG GTCTAAATTT ATTAGGAATT TTAAAATTCC AATTACCAAA TGGGCCCGAC TTAAGATTTA TGGAAGATAA GGTGCCTCCT TTAATAACAC CTTTTCTGAT AGGTGGAACT TTTGGTCTCG CTTCCTCACC ATGCATTACT CCAGTACTGG CTACACTATT AGCTTGGGTA TCGCAAGCAA AAAACCCCAC AATTTCAATA ATCTTTTTGT TCTTCTTTGG ACTAGGTCAA ATAACACCCT TAATACTTGC GGGGGCAACA ACTGAAAATC TAAAGCAGTT TCTAGAACTC AGAAAATATA GTCAAATAAT TCCTACTTTA AGTGGAGTAT TTTTAGTTTC TGTAGGAATT TTAAATTTAA TTTCAAATTG GATTTAA
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Protein sequence | MEQGLNNPGP FTIFLVFTAG LLTSLGPCSL SLLPITIAYI GGTKKNKFKL ISFSGGVIFS LVTLGALSGF LGKIYGQLPS YYSSLVAFIA IIMGLNLLGI LKFQLPNGPD LRFMEDKVPP LITPFLIGGT FGLASSPCIT PVLATLLAWV SQAKNPTISI IFLFFFGLGQ ITPLILAGAT TENLKQFLEL RKYSQIIPTL SGVFLVSVGI LNLISNWI
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