Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_13061 |
Symbol | dxr |
ID | 4718826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 1148725 |
End bp | 1149954 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640080990 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001011620 |
Protein GI | 123966539 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.107798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATACA TCACTGTACT TGGTTCAACA GGTTCAATAG GAACACAAAC TCTGGAAATA GTAAGAGAAC TTCCCAACAA ATTCAAAGTG GTGGCTCTTT CAGCAGGGAG AAATATAGAC TTATTGACGG AGCAAGTTAG TCAGCATAAA CCAGAAGTAA TTGCTATCGA CGATGAAAAT CTTTTAACAG ATTTAAAAAA TAATATTAAC AATTTAGGAA TAAGTAATCC TCCAATAGTT TTAGGTGGCC GAGAGGCAAT TAATTCAGTC GCAGCATGGG ATTCTGCTGA TACCGTAATT ACTGGGATAG TAGGATGTGC TGGACTTATT CCGACGATGT CAGCAATTAA GGCCAGTAAA AATATTGCTC TTGCCAATAA AGAAACATTA ATTGCAGCGG GCTCAGTTGT TATTCCTGCT TTAAAGGAAA ACAAAAGTAG ACTTTTGCCT GCAGACTCTG AGCATTCAGC TATATTTCAA TGCATACAAG GATTACCTAA TTATGAAAAT GCCGATTTTG TAACAGGTCA AATCCCAAAT GGTTTAAAAG CTATTCATTT AACAGCCTCA GGAGGTGCTT TTAGAGATTG GGCAGTAGAA GATTTAAAAA ATGTCACAGT AGAAGATGCA ACTTCTCATC CAAATTGGAG TATGGGGAGA AAAATAACTG TAGATTCTGC CACTCTTATG AACAAAGGAT TAGAAGTTAT TGAAGCACAT TATCTATTTG GTACACCCTA CCAAAATATT GAAATTGTCA TACATCCTCA GAGTATCATT CATTCAATGA TTGAGATGGA AGATTCTTCT GTCTTAGCTC AATTAGGATG GCCTGATATG AAACTCCCAA TTCTATATGC AATGAGTTGG CCAGAAAGAT TCAGAACCAA TTGGAAAAGA TTTAATTTAA CTGAGATTGG CCAACTTACA TTTAAAAAAC CAGATGAAGT AAAATATCCA TGTATGGGAC TTGCCTACTC AGCTGGAAAA TGTTCAGGAA CTATGCCTGC AGTTCTAAAT GCTGCAAATG AAATGGCTGT AGATCAATTT CTTAAAGAAA AAATTTCTTT TCAAGAAATC CCTACTTTTA TAAATAAGAC TTGTGAAGCA CATATTAATA AACTCAACTT AAATCCAAAT TTAGAAGATA TTCTAGAGGT CGATAATTGG GCAAGGATTT TTGTTCAAGA AGAAATCAAA AAAGGTAAAA AATATATAAA TGTAGAATAA
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Protein sequence | MKYITVLGST GSIGTQTLEI VRELPNKFKV VALSAGRNID LLTEQVSQHK PEVIAIDDEN LLTDLKNNIN NLGISNPPIV LGGREAINSV AAWDSADTVI TGIVGCAGLI PTMSAIKASK NIALANKETL IAAGSVVIPA LKENKSRLLP ADSEHSAIFQ CIQGLPNYEN ADFVTGQIPN GLKAIHLTAS GGAFRDWAVE DLKNVTVEDA TSHPNWSMGR KITVDSATLM NKGLEVIEAH YLFGTPYQNI EIVIHPQSII HSMIEMEDSS VLAQLGWPDM KLPILYAMSW PERFRTNWKR FNLTEIGQLT FKKPDEVKYP CMGLAYSAGK CSGTMPAVLN AANEMAVDQF LKEKISFQEI PTFINKTCEA HINKLNLNPN LEDILEVDNW ARIFVQEEIK KGKKYINVE
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