Gene P9515_10311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_10311 
Symbol 
ID4719096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp923474 
End bp924523 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content29% 
IMG OID640080711 
ProductRNA methyltransferase TrmH, group 3 
Protein accessionYP_001011345 
Protein GI123966264 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.988579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TTTCTAAAAA TAATTATTCA AGAAAAAATA ATGATAAATA TTCAAGAAGA 
TCACAATCTA AAAATCGAGA AAAATCTAAT GATTTTAAAG GTGAAAGATT TAACTCAATT 
AAAAATAATA CTTTTGAAAG AACTAATTTA AAAAAAAGTG ATGATTTCAA AGGTAATGAA 
TATAATATTT TAAGATCAAA AGCAAAATCT AGAAATAATT TCATTCAACC CAAAAGAAAA 
ATTTCTACAA ATAATACAAA AGCAGAAAAG TATGCTGAAA ATAGTTCCAA AAATTTATTA 
ATAAATACCA ATGTCAAAAC TTTTGATGAT TGGATATGGG GTAAGCATTC AGTATTTGCG 
ACATTAAATA CTGAAAGACC AATTAACAGA ATTTGGTGTA CTTCAGAAAT ATTTTCGTCA 
GAAAAATTTT TTTTGTTATT AAAGGATCTA AAATCTAAAG GTGTTTTAGT TGAAGAAGTA 
TCTTGGTCAC GACTTTCCCA ATTAACATCC GGTGCCGTTC ATCAAGGAGT TGCGTTGCAG 
TTAGCAACTT CTCAAACTTT ATCTTTAGAT AAATTGATTG GTATAACTAA AAGTAAGTCT 
AATAATCCTA TTTTTGTAGC ATTAGATGGC ATAACTGATC CTCATAATTT AGGAGCAATT 
ATTAGATCTG CAGAAGCTTT TGATTGTAAA GGTATAATAA TTCCTCAAAG AAGATCTGCA 
GGATTAACTG GAACTGTTGC AAAAGTTGCT GCTGGAGCAT TAGAACATAT ACCTGTAAGT 
AGAGTTGTGA ATCTAAATAG AGCAATAGAT GAATTAAAGA AAAATGGTTT TCTAATTGTT 
GGATTATCAG GGGATGGGCA AATTCCTATT TCTAAATTTG ATCAAAAGGC ACCAATTGTA 
GTAGTTGTTG GAGCTGAAAA TAAAGGAATA TCTTTGCTCA CGCAAAAAAA ATGTGATTAC 
TTGCTTAAGA TACCTCTTAG AGGCAAAACT TCTAGTTTAA ATGCTTCTGT AGCAGCAGCT 
ATTTCCTTAT GTTATTTGTC AAATATTTAG
 
Protein sequence
MKNFSKNNYS RKNNDKYSRR SQSKNREKSN DFKGERFNSI KNNTFERTNL KKSDDFKGNE 
YNILRSKAKS RNNFIQPKRK ISTNNTKAEK YAENSSKNLL INTNVKTFDD WIWGKHSVFA 
TLNTERPINR IWCTSEIFSS EKFFLLLKDL KSKGVLVEEV SWSRLSQLTS GAVHQGVALQ 
LATSQTLSLD KLIGITKSKS NNPIFVALDG ITDPHNLGAI IRSAEAFDCK GIIIPQRRSA 
GLTGTVAKVA AGALEHIPVS RVVNLNRAID ELKKNGFLIV GLSGDGQIPI SKFDQKAPIV 
VVVGAENKGI SLLTQKKCDY LLKIPLRGKT SSLNASVAAA ISLCYLSNI