| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_09701 |
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| Symbol | dapF |
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| ID | 4719203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 864545 |
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| End bp | 865405 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640080649 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001011284 |
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| Protein GI | 123966203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0227672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TAATTTTTGA AAAATATCAT GGGAATGGTA ATGATTTTAT AATTATTGAT
ACTAGAAACA AAAATATATT CAATAAATTT ATATCAGAAA ATATTTTCGA TATTAAAGAA
TTGTGTGATC GACAATTTGG TATAGGAGGA GATGGTTTGA TTTTTATCTT GGAACCTAAT
GGAAATAATC ACGCAAGGAT GATTATCTAT AATTCAGATG GTTCAGAAGC TCAAATGTGT
GGAAACGGAA TTAGGTGTTT GGTTCAATAT CTACATAATT CTAAGAAAGG ATCTCATAAC
TCTTCTGAGT ATCGAATAGA AACAAAAGCC GGCTTAAAAA TTGCTCAATA TAATGATGGT
CAAATTTCTG TAAAAATGGG AAAACCAATT ATAGATATTA AGTCTATTCC AACTAATATA
GATAAGAAAC AAAACTTTCT GCCAGCATTT CTTTTTAAAG AATCTAATTT TGAATATGAA
GGATATGCGG TTGGTATGGG AAATCCACAT TTAATATTTT TTGTAGAGGA TATCACAAAA
ATATCTCTTT CTTTATTAGG TCCTGTTTTT GAAAATCATA AATTATTTCC TGAAAAAACT
AATGTACATT TTTCACAAAT AATTAATAGA GATACTATTA AAGTCCTTGT CTGGGAAAGA
GGAGCTGGAG CAACACTTGC TTGCGGAACA GGAGCATGTG CAGTACATGT TGCAGCATTT
AATCTGGGAT TATGTAATTC AGAAACAATA ATAATTCTGC CTGGAGGTAA TCTAAAAATA
AATTGGTCAA GATTAGAGGA AGAGATAGTT ATGAGCGGTA CTGCAAAAAA AGTTTTTTCT
GGAAATTATT TTCTAAACTA A
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| Protein sequence | MKNIIFEKYH GNGNDFIIID TRNKNIFNKF ISENIFDIKE LCDRQFGIGG DGLIFILEPN
GNNHARMIIY NSDGSEAQMC GNGIRCLVQY LHNSKKGSHN SSEYRIETKA GLKIAQYNDG
QISVKMGKPI IDIKSIPTNI DKKQNFLPAF LFKESNFEYE GYAVGMGNPH LIFFVEDITK
ISLSLLGPVF ENHKLFPEKT NVHFSQIINR DTIKVLVWER GAGATLACGT GACAVHVAAF
NLGLCNSETI IILPGGNLKI NWSRLEEEIV MSGTAKKVFS GNYFLN
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