| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_07141 |
|---|
| Symbol | |
|---|
| ID | 4719530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 648917 |
|---|
| End bp | 650557 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640080392 |
|---|
| Product | glucose-methanol-choline (GMC) oxidoreductase:NAD binding site |
|---|
| Protein accession | YP_001011030 |
|---|
| Protein GI | 123965949 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.915082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATATAA ATCCTTATGA TGCAATCGTA GTAGGTTCAG GTGCCACAGG AGGAGTAGCT
GCACTTACTT TAGCCGAACA AGGAATAAGA GTGCTAGTAA TAGAAGCTGG TCCTCAAATT
AAAAGAACTG AGGCTAGCAG TAATGAGCCA AAAGATACCT TAAACAGATT ATCAGGAATA
ATATCAAAAA AACACGCTAA TCAATGTCAG CATCCCGGTT ATTGGAAAAA TAATCCTAAT
TTATATAAAA ACGAATTAAA ACATCCTTAT GTTCAACAAA AAAACAAGCC ATTCCTTTGG
ACTCAAGGAA ACCAATATGG AGGAAGATCA TTAACGTGGG GAGGTATTAC CTTAAGATTT
TCTAGAGAGG ATTTTCATCC ATCAAAAAAA GATGGATATG GGCCAGATTG GCCTATTTCC
TACGACGAAT TATCACCTCA TTATGATTTT ATAGAAAATT TTTGTGGAAT ATATGGACAT
AAAGATAACA TCAAAGAAGT CCCAAATGGT AAATATATTG GGAAGATACC TCTTACAAAA
ATTGAAAGTA TTTTTGGCAA TCAAGTCAAA TCGAAATTAA ACTATCCCTT TATTCAATCT
AGAGGATTCG ATCGTAATTC TTCAGTAAAA GAGGAACAAT GGCCAAAATC TTCGAGTGTA
GGGACCACAT TCAAAAAAGC ACTAGAGACT GGAAATGTCC AAATACTCTC TAATCACTTA
GTAGAATCAT TCGAAACGGA TAAAATAACA GAGCTTGCTT CAAAAATAAT CATCGTAAAT
GTTGAAAATG GTAAAAGAAA ATCATTAAAT TGCGATTTAA TTATTCTATG TGCATCAACA
ATCTCAACAT TGAGGATACT ACTTAACTCT GAAACCAAAT CAAATTCTTC TGGTTTTAAA
GATACATCTG GAAAATTAGG AAAATTTCTA ATGGATCATA TTTCTGTCTG TAGGTTTTTT
TCAGTTCCAA ATACAACTCA AAGAAACAAT ATATCTAATT CGTATCCTGA TCTTTCCGGA
GCTGGGAGTT TTTTCATACC CTTTGGGACA AATCTGCCCA AACCTGAAAG TATTAATTTT
TTACGGGGTT ATGGAATTTG GGGAGCAATT GACCGTCTAG GAATACCAAA GTTTTTGCAA
AAAGACTTAA ATTCTTCTAC AGGTTTTCTA ATCGCTCATG GTGAGGTCCT ACCAAGAGAA
GAAAATTCAG TCTCCCTTTC TGACAAAACA GACCGATGGG GGATTCCGGT CCCTCATATT
GAATTCGAAT GGAGTGAAAA TGAATTAAAT ATGGCTAAAC ATATGGAGAG AACGATGCGA
GATTCAATAA AAGCTGCAGA TGGAAAAATC AAAGGGATCG ATGAACTTAT AAAAATCCCA
TATGCAGGGT TGTTTACAAA AAAATCAATT GCTCTTTCAG GAAATCCGCC ACCCCCGGGA
TACTATATCC ATGAAGTAGG AGGAGCACCA ATGGGATTTA GAGAGGAAGA TAGTGTTGTA
AATAAATCAA ATAGACTTTG GAGATGTAAG AATGTTCTTG TATTAGATGG TGCATGTTGG
CCCACTTCTT CATGGCAGAG TCCAACTTTA ACAATGATGG CTATAAGCAG AAGAGCTTGT
TTAAAAGTTA AAAAGACTTA G
|
|---|
| Protein sequence | MDINPYDAIV VGSGATGGVA ALTLAEQGIR VLVIEAGPQI KRTEASSNEP KDTLNRLSGI
ISKKHANQCQ HPGYWKNNPN LYKNELKHPY VQQKNKPFLW TQGNQYGGRS LTWGGITLRF
SREDFHPSKK DGYGPDWPIS YDELSPHYDF IENFCGIYGH KDNIKEVPNG KYIGKIPLTK
IESIFGNQVK SKLNYPFIQS RGFDRNSSVK EEQWPKSSSV GTTFKKALET GNVQILSNHL
VESFETDKIT ELASKIIIVN VENGKRKSLN CDLIILCAST ISTLRILLNS ETKSNSSGFK
DTSGKLGKFL MDHISVCRFF SVPNTTQRNN ISNSYPDLSG AGSFFIPFGT NLPKPESINF
LRGYGIWGAI DRLGIPKFLQ KDLNSSTGFL IAHGEVLPRE ENSVSLSDKT DRWGIPVPHI
EFEWSENELN MAKHMERTMR DSIKAADGKI KGIDELIKIP YAGLFTKKSI ALSGNPPPPG
YYIHEVGGAP MGFREEDSVV NKSNRLWRCK NVLVLDGACW PTSSWQSPTL TMMAISRRAC
LKVKKT
|
|---|
| |