Gene P9515_05841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_05841 
SymbolfixC 
ID4719718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp522207 
End bp523340 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content34% 
IMG OID640080261 
ProductNAD binding site 
Protein accessionYP_001010900 
Protein GI123965819 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.188024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGAAT TTGACGCCAT AATAATTGGA GGTGGTTTAT CTGGATCTTC AACAGCTCTA 
AACCTATCAA AAAAAGGTTA TTCAGTTTTA ATTATAGAAA AGGAAGCAAC AGGAATTATT
AAGCCCTGCG CAGGAGGGAT GGCATCTTCA ATGAAACAAT ATCTCCCATT AGATATTGAT
CAAGCAATAG AATCCAAAAT AAGGAATGTT GAATTCAGAT GGGAATCATC TGATAATGTT
AACGCTGACC TTTCTGGCGA ATCACCTTTT TGGATAATTA GAAGAGAAAA ATTAGATCAA
TTATTACTTG ATGAAGCTCT AAAGAATGGC ATTGAAATAC TGAGACCAGC GCAGGTTGAA
GAAATAATAT CTCAAAATAA GACTTGGAGA ATAAAATGCA GTCATAAAGA TATTTATAAA
TCTAAATATC TTGTTATCGC TGACGGTTCA CAATCACAAT GGGCAGGCTA TTTTAATCTG
GGTCCAAGAA AACCAAAATT TGCCAACACT ATTGCCTTAA GGTTAAAAGG TTTAGGAAAT
ATTCCCAAAG ATTCAGTTAG ATTTGAGTTT GGTTTTATAA AATATGGGTT TGCGTGGGCA
TTCCCATTAA AAGATAGTGT CAATATTGGA TTAGGCACTT TTATAAACAA TAAGCTTTTA
GAAGACGAAG CCCTGAATAA TAAAGTATTA AAAAGTTTCG GATTTGAAGA TTTATCTTTT
GAAAAAGTTC ATAAAAAACT AAGGATTTGG AATGGCACTC ACAAACTCAA TGGAGATAGA
GTAGTTGCAG TGGGGGATGC TGCATCCCTT TGCGATCCAT TTTTAGCAGA AGGGATAAGG
CCTTCTTTAA TTAGTAGTTA TTTCGCTGCA GAAAGTATCC ACCAATGTTT ATCTAGTAAT
AAAAGTGATT TAAATACTTA TTCAATAAAA ATTAATAATG AATGGGGGAA ATCTATGGCA
TGGGGCAAGA GAATTGCTCA AATCTTTTAT AGGTTCCCAA AAACTGGGTA TCAATTAGGA
GTCAAACGAA AAACAGCTCC AAAAAGAATC GCTCAAATAT TATCTGGTCA AATGAGTTAT
GAAGATATAG CTAAGAGAGT TATAAAGAGG CTATTAACAA ATAGTCAAGG TTAA
 
Protein sequence
MKEFDAIIIG GGLSGSSTAL NLSKKGYSVL IIEKEATGII KPCAGGMASS MKQYLPLDID 
QAIESKIRNV EFRWESSDNV NADLSGESPF WIIRREKLDQ LLLDEALKNG IEILRPAQVE
EIISQNKTWR IKCSHKDIYK SKYLVIADGS QSQWAGYFNL GPRKPKFANT IALRLKGLGN
IPKDSVRFEF GFIKYGFAWA FPLKDSVNIG LGTFINNKLL EDEALNNKVL KSFGFEDLSF
EKVHKKLRIW NGTHKLNGDR VVAVGDAASL CDPFLAEGIR PSLISSYFAA ESIHQCLSSN
KSDLNTYSIK INNEWGKSMA WGKRIAQIFY RFPKTGYQLG VKRKTAPKRI AQILSGQMSY
EDIAKRVIKR LLTNSQG