| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_05171 |
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| Symbol | ispD |
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| ID | 4720030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 463893 |
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| End bp | 464564 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640080192 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001010833 |
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| Protein GI | 123965752 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0621483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCATGTAT TAATACCCGC TGCAGGTAGT GGCAGAAGAA TGGAAGCTGG AAAAAATAAA
TTACTTATTG ATTTAGAAGG TGAATCTCTT ATTTATTGGA CTTTAAAATC TGTATTCTCT
GCAAGTTTGG TAAGTTGGGT AGGAATAATT GGACAACCAA ATGATAAAAA AAAATTATTA
AATTCAGTAA AAAAATTTTC TAATGAAATT GAATGGATTA ACGGTGGAAA TACAAGGCAA
GAGTCTGTCT TTAATGGTTT AAATTCACTA CCTTCTAATG CTGAGAAAGT TTTAATTCAT
GATGGTGCAA GATGCTTAAT AAATCCTGAC TTGATCAATA AATGTGCTTT GGAATTAGAA
GAAAATGATG CAGTTATTTT AGCTACTAAA GTTACAGACA CAATAAAAAT AGTTGATAAT
GAAGGTTATA TCCAACAAAC GCCAAATAGA CAAAATTTGT GGGCAGCTCA AACTCCTCAA
GGTTTTCTAG TGAAGAAATT AAGAGAAGCT CATGAAATGG CGATTGAGAA AAATTGGAAA
GTTACAGATG ATGCCTCACT CTTTGAAATG TTGAATTGGC AAGTGAGAAT TATTGAAGGG
AATTCTTCGA ACATAAAAAT CACATCTCCA TTAGATTTGC AAATAGCGAA ACTATTTTTA
AAAGATTATT AG
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| Protein sequence | MHVLIPAAGS GRRMEAGKNK LLIDLEGESL IYWTLKSVFS ASLVSWVGII GQPNDKKKLL
NSVKKFSNEI EWINGGNTRQ ESVFNGLNSL PSNAEKVLIH DGARCLINPD LINKCALELE
ENDAVILATK VTDTIKIVDN EGYIQQTPNR QNLWAAQTPQ GFLVKKLREA HEMAIEKNWK
VTDDASLFEM LNWQVRIIEG NSSNIKITSP LDLQIAKLFL KDY
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