Gene P9515_04961 details

Gene Information

• Locus tag: P9515_04961
• Symbol: salX
• ID: 4720009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 442728
• End bp: 443414
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640080171
• Product: ABC transporter ATP-binding protein
• Protein accession: YP_001010812
• Protein GI: 123965731
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAAAA AAGTTGCGAC CTTAGAAAAA GTATCTAAGA CTTACGGTAA AGATGATCTT 
ATTGTAAAAG CCTTAGATAA TGTAAATTTA GAAATTTATA AAGGTGACTA TTTGGCTGTT 
ATGGGTGCAA GTGGTTCAGG CAAAAGTACT GCAATGAATA TTATTGGCTG TCTAGATAGG 
CCCTCCAAGG GAGTTTATAA ATTAAATGGG ACTCCAGTTG AAAATTTATC TGATGACGAA 
TTAGCTGAGT TAAGAAACCA AAAATTAGGA TTCGTTTTCC AACAATTTCA TCTTCTTTCA 
GACGCTACAG CACTAGAAAA TGTACTTTTA CCAATGATTT ATGCGGGTGT CAATCCAATT 
GAAAGAGAAG AAAGAGCTAA AAACGCATTA GATAAAGTTG GGCTTTCTAA GAGAATTGAT 
AATCGTCCTA ATCAGTTATC CGGAGGACAA CAACAACGTG TCGCAATTGC AAGAGCAATT 
ATAAATAATC CTTCACTATT ATTGGCAGAT GAGCCTACTG GAGCATTGGA TTCAAAGACA 
ACAGAAGATG TATTAGACCT TTTTGATAAA TTACATGAAT CAGGGATAAC TATAGTTTTA 
GTAACTCACG AAGATGAAGT TGCAAGTCGT GCAAAAAAAG TTGCAAAGTT TAAAGATGGG 
AAAATAGTTG AATTAAAAAT AAAATAA 

 

Protein sequence

MTKKVATLEK VSKTYGKDDL IVKALDNVNL EIYKGDYLAV MGASGSGKST AMNIIGCLDR 
PSKGVYKLNG TPVENLSDDE LAELRNQKLG FVFQQFHLLS DATALENVLL PMIYAGVNPI 
EREERAKNAL DKVGLSKRID NRPNQLSGGQ QQRVAIARAI INNPSLLLAD EPTGALDSKT 
TEDVLDLFDK LHESGITIVL VTHEDEVASR AKKVAKFKDG KIVELKIK