| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_03371 |
|---|
| Symbol | uvrD |
|---|
| ID | 4718695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 310235 |
|---|
| End bp | 312643 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640080003 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001010653 |
|---|
| Protein GI | 123965572 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCAAA CTCACAACTT CCTTTTTAAC TCTTTAAATA ATGCACAACT AAAAGCAGTC
AATCATATCA ATGGGCCACT GCTAGTTGTA GCAGGTGCAG GTAGTGGGAA AACTAAGGCT
CTTACTCATC GAATTGCTAA TTTAATAGAA AATCACTCAG TAGATCCTCA TAATATCTTG
GCAGTAACTT TTACAAATAA AGCTGCAAAA GAAATGAAAG CAAGACTTCA AGTACTACTT
GCACAAGAAC TAGCTTTCAA TCAATTTGGG CAGCCTTGGG CAACTCTCAA AGAATTTGAT
CAAAACCAAT TAAGAACAAA TATTGATCAA GAAAGGCTCA AGGACCTATG GATAGGAACT
TTTCATTCAC TATTTTCAAG GCTGTTAAGA TACGATATTG AAAAATATCA AGATCCTGAA
GGGTTAAGAT GGACGAGGCA ATTTTCTATT TATGACGAGA CAGATTCTCA GACCTTGGTA
AAGGAAATTA TTAGTCAAGA TATGAGTCTT GATCCAAAAA GATTTGATCC CAAGAAAATA
AAGAGAGCAA TTAGTAACGC AAAAAATCAA TGTTTTACAG CTAAGGAACT CGAAGAGAAA
GCTGATAATC ATTTTGATAA AGTTATTGCA GATGCTTATA GAAGATACAA AATATCTCTC
TCTAAAAATA ATGCTTTAGA TTTTGATGAT CTTTTACTAC TTCCGGTTTT TTTATTAAGG
CAAAATGATT TAGTTAGGGA TTACTGGCAT AAAAGATTCC AGCATGTTTT AGTTGATGAA
TATCAAGATA CAAATAGGAC ACAATATGAA CTTATCAAAT TAATTACGGC TGGTAATACT
AAACCAAATA AATTTTGCGA ATGGAATAAT CGATCAATTT TTGTTGTTGG AGATGCTGAT
CAAAGTATTT ATAGTTTTAG AGCAGCCGAT TTTAGAATAT TAATTGGATT TCAAGAAGAT
TTTAAAGGTC CATCTAATAA TGATAAGAAA GCATCTTTGG TGAAATTAGA AGAAAACTAT
AGATCTTCAT CAAATATTCT TAACGCTGCA AATTCTTTAA TTGAAAATAA TACTGAAAGA
ATTGATAAAG TTTTAAAGCC TACAAAGGAA GAAGGAGAAC TTTTAAAGTT GCTTAGCTGT
GATGATGAAA TATCTGAAGC TGAAGCAATA ACAACAAAAT TAAGATCTCT AAACAATTAT
AATAATCAAC CAATTTGGAG AAATTTCGCA ATCCTATATA GGACTAGGGC TCAATCTAGG
GTATTAGAAG AATCACTAGT AAGATGGAGA ATACCTTATA CAATCTTTGG CGGATTACGT
TTTTATGACA GAAGAGAAGT TAAAGATGCA GTTGCCTATT TAAAAGTATT AGTAAATTCT
TCAGATAATG TAAGCCTTTT GAGAATCATA AATGTGCCGA GAAGAGGCAT AGGAAAAACA
ACTATTCAAA AGCTTAGTGA TCTATCAATT AAGTTAAACA TTCCTTTATG GGAGGTCATA
AATGACAAAC AAAGTTTAGA TGAGACTATA GGTAGATCGT CAAAGGGCAT TAATAAATTC
ACAGACCTGA TGAATGACCT TCTTTGCTAC GTAGAGAACT CAGGACCTGC TCAAATTCTT
CAATTAATTT TAGAAAAAAG CGGTTATTTA AATGAATTGT TAAGGTCTGG TTCAGAGGAA
TCTGAAGACA GACGAAATAA TCTGCAGGAA TTAATAAATG CTGCTACTCA ATTCGAAGAA
GAGACAGAGA ATGCAAATGT AGAAGGATTC TTGTCAACAG CAGCTTTAAC AACAGATAAT
GATACGAAAA AAAATCATCC CAACTCTGTT ACTTTAATGA CTCTCCATAA CAGTAAAGGA
TTAGAATTTC AAAATGTATT TATAACTGGA CTCGAACAAG GTTTGTTCCC AAGCCATAGG
TCCATTGATA CGCCTTCTCT TCTAGAAGAA GAAAGAAGAT TATGCTATGT AGGTATAACA
AGAGCTAAAG AGAGAGTTTT CTTATCACAT GCAAGGGAGA GGAGATTGTG GGGAGGTATG
CGAGAACCAA CAATTCCGTC AATCTTTCTC TCAGAAATAC CAGAGGAATT AATTGATGGC
GAATTACCTC AATCTGGTGG TGCTTCTATT AGAAGGGATC GACATCTTGA CCGTTTAACA
AGAGTAGATA GGAACAATTC AAATGAATTT TTAAATAAAC CTATCAATGC AGTGAGAAAG
CTATATTCCG GACCCAGCAA AGGTAAAAGT TGGATAATAG GAGATAAAGT AATTCACTCC
AAATTTGGTA AGGGAGAAAT TATACATATT TTTGGTAGTG GAGAAAAAAT ATCGTTAGCA
GTTAAATTTG GAGATAAAGG TAGCAAAATT TTAGACCCAA GATTAGCTCC AATAAGAGCA
ATAAACTGA
|
|---|
| Protein sequence | MSQTHNFLFN SLNNAQLKAV NHINGPLLVV AGAGSGKTKA LTHRIANLIE NHSVDPHNIL
AVTFTNKAAK EMKARLQVLL AQELAFNQFG QPWATLKEFD QNQLRTNIDQ ERLKDLWIGT
FHSLFSRLLR YDIEKYQDPE GLRWTRQFSI YDETDSQTLV KEIISQDMSL DPKRFDPKKI
KRAISNAKNQ CFTAKELEEK ADNHFDKVIA DAYRRYKISL SKNNALDFDD LLLLPVFLLR
QNDLVRDYWH KRFQHVLVDE YQDTNRTQYE LIKLITAGNT KPNKFCEWNN RSIFVVGDAD
QSIYSFRAAD FRILIGFQED FKGPSNNDKK ASLVKLEENY RSSSNILNAA NSLIENNTER
IDKVLKPTKE EGELLKLLSC DDEISEAEAI TTKLRSLNNY NNQPIWRNFA ILYRTRAQSR
VLEESLVRWR IPYTIFGGLR FYDRREVKDA VAYLKVLVNS SDNVSLLRII NVPRRGIGKT
TIQKLSDLSI KLNIPLWEVI NDKQSLDETI GRSSKGINKF TDLMNDLLCY VENSGPAQIL
QLILEKSGYL NELLRSGSEE SEDRRNNLQE LINAATQFEE ETENANVEGF LSTAALTTDN
DTKKNHPNSV TLMTLHNSKG LEFQNVFITG LEQGLFPSHR SIDTPSLLEE ERRLCYVGIT
RAKERVFLSH ARERRLWGGM REPTIPSIFL SEIPEELIDG ELPQSGGASI RRDRHLDRLT
RVDRNNSNEF LNKPINAVRK LYSGPSKGKS WIIGDKVIHS KFGKGEIIHI FGSGEKISLA
VKFGDKGSKI LDPRLAPIRA IN
|
|---|
| |