| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_02221 |
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| Symbol | rluD |
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| ID | 4720358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 204232 |
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| End bp | 205194 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640079885 |
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| Product | putative pseudouridylate synthase specific to ribosomal large subunit |
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| Protein accession | YP_001010538 |
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| Protein GI | 123965457 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.135305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAA GCAATGCCAA TTCATTTGGA GTAGGAGAAG GTGAACTAAC AGAAATTATT
TATGAGCTAC CACTTCCTAT GCGACTCGAT AGGTGGCTAG TAAGCAAAAG ACCCGAACAA
AGTAGAGCCA GAATACAAAA TCTTATAAAC GCAGGATTAG TTCTTATTAA CTACAAAACT
GCAAAAGCTA AAACACCACT AAAAACTGGA GATAATATAC AAATTTGGAT GCCTCCTCCA
GAACCTCTCG TCTATTTGAA GCCAGAAAAG ATGCACTTAA ATATTCTTTA TGAAGATGAA
CATATAATTG TTATTAACAA GCAATCAGGA TTAATAGTCC ATCCAGCCCC AGGCCATAAA
TCAGGCACCT TAGTGAACGG ACTACTCTTT CATTGTAAGG ACCTTCCAGG AATTAATGGA
AAATTAAGAC CAGGGATCGT GCATAGATTG GATAAAGACA CTTCTGGTTG TATGGTTGTA
GCAAAAAGCC AAGAATCACT TGTAAATCTT CAAATACAGA TAAGAGATAA AATAGCATCA
CGAAATTATA TTGCGGTAAT TCATGGCGTA CCAAATACTT CAGAAGGCAA AATCGTTGGC
CACATAGGAA GGGACAAAAT AAATAGATTA AAGTATGCAG TAGTTGATGA AAATTCCGGA
AGATATGCCT GTACTTACTG GAAATTATTA GAAAGATTTG GTAATTACTC GCTGATGAGT
TTCAAATTAG ATACTGGAAG AACACATCAA ATAAGAGTTC ATTGCGCATA CATTAATCAC
CCTATCCTTG GTGATCCTTT ATATGGAAGA TGTAAAAAAC TGCCTTGCAA ATTAGATGGT
CAGGCTTTAC ACGCTATAGA GCTTGGACTT TTTCATCCTA TTAATGGAGA AGAAATGAAA
TTCGAAGCAG ATTTACCCCA AGAATTTGTA AAATTATTGA GGATCTTAAA AAAATTTAAT
TAA
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| Protein sequence | MKSSNANSFG VGEGELTEII YELPLPMRLD RWLVSKRPEQ SRARIQNLIN AGLVLINYKT
AKAKTPLKTG DNIQIWMPPP EPLVYLKPEK MHLNILYEDE HIIVINKQSG LIVHPAPGHK
SGTLVNGLLF HCKDLPGING KLRPGIVHRL DKDTSGCMVV AKSQESLVNL QIQIRDKIAS
RNYIAVIHGV PNTSEGKIVG HIGRDKINRL KYAVVDENSG RYACTYWKLL ERFGNYSLMS
FKLDTGRTHQ IRVHCAYINH PILGDPLYGR CKKLPCKLDG QALHAIELGL FHPINGEEMK
FEADLPQEFV KLLRILKKFN
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