Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_01581 |
Symbol | tmk |
ID | 4720294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 144439 |
End bp | 145071 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640079821 |
Product | thymidylate kinase |
Protein accession | YP_001010474 |
Protein GI | 123965393 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.978183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGTA AATTTATTGT TATTGAAGGA ATAGATGGTT GTGGGAAAAC AACCCAAATT GATGAGATTT CAAGATGGCT ACCTACTAGT GGTCTAATGG GAAAGAATTC AAAATTAATA AAAACTAGGG AACCTGGGGG AAGCTTATTA GGTAAAAAAC TTAGAAATTT AATACTTGAC AACAATAAAA ATAATAAGCC TTCATCACTT GCTGAGTTGT TACTTTATTC TGCAGATAGA GCAGAACATG TTTCTAAAAT AATTTCTCCT GCATTAAAAA AAGAGGACTG GGTAATTAGC GATAGATTTT CTGACTCTAC ACTTGCTTAT CAAGGCTATG GGAGACATAT CAATCTAGAA ATAATAAAAA ATATCGAATC AATTGTTTGT CAAGGAGAAT ATCCAGACCT TACTATTTTT CTGGAAATTT CAGCAGAGGA GAGTATTTTA CGAAGAAAAA ATTTTGTCCC TGACAGAATG GAATCCGAAG GTATCAATTT TTTACAAAAA GTCAATGAAG GATTCAAGTT GATCGCTAAA GAAAAAAAGT GGAAAGTAAT ATCTGCGACC CAAAATATTA CTGCTATTTC TAATGAAATT AAAGAAACGT TACTAAAAAC TTTTCGTAAC TAA
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Protein sequence | MKGKFIVIEG IDGCGKTTQI DEISRWLPTS GLMGKNSKLI KTREPGGSLL GKKLRNLILD NNKNNKPSSL AELLLYSADR AEHVSKIISP ALKKEDWVIS DRFSDSTLAY QGYGRHINLE IIKNIESIVC QGEYPDLTIF LEISAEESIL RRKNFVPDRM ESEGINFLQK VNEGFKLIAK EKKWKVISAT QNITAISNEI KETLLKTFRN
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